DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTSS
Uniprot ID:
Q86VQ1
Source protein:
Glucocorticoid-induced transcript 1 protein
Source gene:
GLCCI1
Class:
DEG_SPOP_SBC_1
Location:
161:165
E3 ligase:
SPOP
DEGRON score:
0.7782
ASA_SCORE:
87.4
COIL:
0.8156
CONS_SCORE:
0.3444
DSS_SCORE:
0.6536
HELIX:
0.0946
FCONS_SCORE:
0.6214
RIG_SCORE:
0.6985
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S172C
TCGA-98-A53I
LUSC
TCGA
VRTSS
DEG_SPOP_SBC_1
0.5833
p.S172C
DO219182
LUSC
ICGC
VRTSS
DEG_SPOP_SBC_1
0.5833
p.D154G
TCGA-AG-A002
READ
TCGA
VRTSS
DEG_SPOP_SBC_1
0.1389
p.D154G
TCGA-CA-6718
COAD
TCGA
VRTSS
DEG_SPOP_SBC_1
0.1389
p.D154G
DO7801
COAD
ICGC
VRTSS
DEG_SPOP_SBC_1
0.1389
p.S172Y
TCGA-F1-6874
STAD
TCGA
VRTSS
DEG_SPOP_SBC_1
0.5833
p.S172Y
DO38201
STAD
ICGC
VRTSS
DEG_SPOP_SBC_1
0.5833
p.S165N
TCGA-IB-7651
PAAD
TCGA
VRTSS
DEG_SPOP_SBC_1
0.7069
p.S165N
DO46657
PAAD
ICGC
VRTSS
DEG_SPOP_SBC_1
0.7069
p.R168K
TCGA-ZF-A9RC
BLCA
TCGA
VRTSS
DEG_SPOP_SBC_1
0.25
p.R168K
DO219068
BLCA
ICGC
VRTSS
DEG_SPOP_SBC_1
0.25
p.R162Q
DO228050
EOPC
ICGC
VRTSS
DEG_SPOP_SBC_1
0.6218
p.V161F
DO229028
LICA
ICGC
VRTSS
DEG_SPOP_SBC_1
0.7068
p.K155N
DO229022
LICA
ICGC
VRTSS
DEG_SPOP_SBC_1
0.2778
p.Q160E
DO23533
LIRI
ICGC
VRTSS
DEG_SPOP_SBC_1
0.3056
p.S172F
DO222868
MELA
ICGC
VRTSS
DEG_SPOP_SBC_1
0.5833
p.A153V
SIDM00908
Non-Cancerous
GDSC
VRTSS
DEG_SPOP_SBC_1
0.1111
p.A153V
SIDM00909
Melanoma
GDSC
VRTSS
DEG_SPOP_SBC_1
0.1111
p.A153V
SIDM00100
Mesothelioma
GDSC
VRTSS
DEG_SPOP_SBC_1
0.1111
p.R162W
ACH-001068
Lymphoma
CCLE
VRTSS
DEG_SPOP_SBC_1
0.7523
p.Q159P
ACH-002061
Leukemia
CCLE
VRTSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with GLCCI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13439
Golgin subfamily A member 4
DEG_SPOP_SBC_1
94:98
VRTSS
SPOP
0.9897
More...
Q7Z6G8
Ankyrin repeat and sterile alpha motif domain-containing protein 1B
DEG_SPOP_SBC_1
376:380
VRTSS
SPOP
0.996
More...
Q8TDG4
Helicase POLQ-like
DEG_SPOP_SBC_1
253:257
VRTSS
SPOP
0.5893
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9817:9821
VRTSS
SPOP
0.8575
More...
Q8WY36
HMG box transcription factor BBX
DEG_SPOP_SBC_1
511:515
VRTSS
SPOP
0.9823
More...
Q9BY84
Dual specificity protein phosphatase 16
DEG_SPOP_SBC_1
487:491
VRTSS
SPOP
0.7285
More...
Q8TE59
A disintegrin and metalloproteinase with thrombospondin motifs 19
DEG_SPOP_SBC_1
702:706
VRTSS
SPOP
0.6468
More...
Q5T0Z8
Uncharacterized protein C6orf132
DEG_SPOP_SBC_1
310:314
VRTSS
SPOP
0.9965
More...
Q86VQ1
Glucocorticoid-induced transcript 1 protein
DEG_SPOP_SBC_1
161:165
VRTSS
SPOP
0.7782
More...