DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTSS
Uniprot ID:
Q8TE59
Source protein:
A disintegrin and metalloproteinase with thrombospondin motifs 19
Source gene:
ADAMTS19
Class:
DEG_SPOP_SBC_1
Location:
702:706
E3 ligase:
SPOP
DEGRON score:
0.6468
ASA_SCORE:
88.18
COIL:
0.9304
CONS_SCORE:
0.3886
DSS_SCORE:
0.1917
HELIX:
0.0512
FCONS_SCORE:
0.7497
RIG_SCORE:
0.746
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q696E
TCGA-A5-A0GP
UCEC
TCGA
VRTSS
DEG_SPOP_SBC_1
0.1667
p.Q696E
DO41109
UCEC
ICGC
VRTSS
DEG_SPOP_SBC_1
0.1667
p.T704P
TCGA-A5-A2K5
UCEC
TCGA
VRTSS
DEG_SPOP_SBC_1
0.7031
p.T704P
TCGA-CD-A48C
STAD
TCGA
VRTSS
DEG_SPOP_SBC_1
0.7031
p.T704P
DO47912
STAD
ICGC
VRTSS
DEG_SPOP_SBC_1
0.7031
p.T704P
DO41379
UCEC
ICGC
VRTSS
DEG_SPOP_SBC_1
0.7031
p.R693T
TCGA-CR-7365
HNSC
TCGA
VRTSS
DEG_SPOP_SBC_1
0.0833
p.R693T
DO15991
HNSC
ICGC
VRTSS
DEG_SPOP_SBC_1
0.0833
p.R693K
TCGA-DA-A3F8
SKCM
TCGA
VRTSS
DEG_SPOP_SBC_1
0.0833
p.R693K
DO37418
SKCM
ICGC
VRTSS
DEG_SPOP_SBC_1
0.0833
p.A715P
TCGA-QB-AA9O
SKCM
TCGA
VRTSS
DEG_SPOP_SBC_1
0.0833
p.A715P
DO51267
SKCM
ICGC
VRTSS
DEG_SPOP_SBC_1
0.0833
p.L711R
TCGA-RD-A7C1
STAD
TCGA
VRTSS
DEG_SPOP_SBC_1
0.1944
p.L711R
TCGA-X8-AAAR
ESCA
TCGA
VRTSS
DEG_SPOP_SBC_1
0.1944
p.L711R
DO233698
GACA
ICGC
VRTSS
DEG_SPOP_SBC_1
0.1944
p.L711R
DO228599
PRAD
ICGC
VRTSS
DEG_SPOP_SBC_1
0.1944
p.L711R
DO50132
STAD
ICGC
VRTSS
DEG_SPOP_SBC_1
0.1944
p.A705S
SIDM00320
Non-Small Cell Lung Carcinoma
GDSC
VRTSS
DEG_SPOP_SBC_1
0.7588
p.A705S
VMRC-LCD
lung
COSMIC
VRTSS
DEG_SPOP_SBC_1
0.7588
p.A699S
ACH-001233
Lung Cancer
CCLE
VRTSS
DEG_SPOP_SBC_1
0.25
p.A699S
VMRC-LCD
lung
COSMIC
VRTSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with ADAMTS19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13439
Golgin subfamily A member 4
DEG_SPOP_SBC_1
94:98
VRTSS
SPOP
0.9897
More...
Q7Z6G8
Ankyrin repeat and sterile alpha motif domain-containing protein 1B
DEG_SPOP_SBC_1
376:380
VRTSS
SPOP
0.996
More...
Q8TDG4
Helicase POLQ-like
DEG_SPOP_SBC_1
253:257
VRTSS
SPOP
0.5893
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9817:9821
VRTSS
SPOP
0.8575
More...
Q8WY36
HMG box transcription factor BBX
DEG_SPOP_SBC_1
511:515
VRTSS
SPOP
0.9823
More...
Q9BY84
Dual specificity protein phosphatase 16
DEG_SPOP_SBC_1
487:491
VRTSS
SPOP
0.7285
More...
Q8TE59
A disintegrin and metalloproteinase with thrombospondin motifs 19
DEG_SPOP_SBC_1
702:706
VRTSS
SPOP
0.6468
More...
Q5T0Z8
Uncharacterized protein C6orf132
DEG_SPOP_SBC_1
310:314
VRTSS
SPOP
0.9965
More...
Q86VQ1
Glucocorticoid-induced transcript 1 protein
DEG_SPOP_SBC_1
161:165
VRTSS
SPOP
0.7782
More...