DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VYSSS
Uniprot ID:
O75494
Source protein:
Serine/arginine-rich splicing factor 10
Source gene:
SRSF10
Class:
DEG_SPOP_SBC_1
Location:
104:108
E3 ligase:
SPOP
DEGRON score:
0.9991
ASA_SCORE:
80.22
COIL:
0.9306
CONS_SCORE:
0.4558
DSS_SCORE:
0.497
HELIX:
0.054
FCONS_SCORE:
0.864
RIG_SCORE:
0.6831
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R109H
TCGA-AP-A051
UCEC
TCGA
VYSSS
DEG_SPOP_SBC_1
0.3056
p.R109H
DO42673
UCEC
ICGC
VYSSS
DEG_SPOP_SBC_1
0.3056
p.V104M
DO229058
LICA
ICGC
VYSSS
DEG_SPOP_SBC_1
0.7208
p.Y105H
DO229213
THCA
ICGC
VYSSS
DEG_SPOP_SBC_1
0.7229
Drug responses associated with SRSF10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60307
Microtubule-associated serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
707:711
VYSSS
SPOP
0.9777
More...
O75494
Serine/arginine-rich splicing factor 10
DEG_SPOP_SBC_1
104:108
VYSSS
SPOP
0.9991
More...
O75694
Nuclear pore complex protein Nup155
DEG_SPOP_SBC_1
602:606
VYSSS
SPOP
0.7963
More...
Q8IZJ1
Netrin receptor UNC5B
DEG_SPOP_SBC_1
484:488
VYSSS
SPOP
0.9604
More...
Q92753
Nuclear receptor ROR-beta
DEG_SPOP_SBC_1
132:136
VYSSS
SPOP
0.5622
More...
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SPOP_SBC_1
62:66
VYSSS
SPOP
0.9965
More...
Q9UID3
Vacuolar protein sorting-associated protein 51 homolog
DEG_SPOP_SBC_1
650:654
VYSSS
SPOP
0.9994
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
1303:1307
VYSSS
SPOP
0.6435
More...
Q5TZJ5
Spermatogenesis-associated protein 31A1
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.6282
More...
Q8IWB4
Spermatogenesis-associated protein 31A7
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.9981
More...
Q5VU36
Spermatogenesis-associated protein 31A5
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.9754
More...
Q5VVP1
Spermatogenesis-associated protein 31A6
DEG_SPOP_SBC_1
1195:1199
VYSSS
SPOP
0.982
More...
Q5VYP0
Spermatogenesis-associated protein 31A3
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.6896
More...