DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VYSSS
Uniprot ID:
Q8IZJ1
Source protein:
Netrin receptor UNC5B
Source gene:
UNC5B
Class:
DEG_SPOP_SBC_1
Location:
484:488
E3 ligase:
SPOP
DEGRON score:
0.9604
ASA_SCORE:
64.72
COIL:
0.7412
CONS_SCORE:
0.2883
DSS_SCORE:
0.4273
HELIX:
0.0418
FCONS_SCORE:
0.833
RIG_SCORE:
0.6973
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S492F
TCGA-A5-A2K5
UCEC
TCGA
VYSSS
DEG_SPOP_SBC_1
0.2222
p.S492F
DO41379
UCEC
ICGC
VYSSS
DEG_SPOP_SBC_1
0.2222
p.T490M
TCGA-AA-3947
COAD
TCGA
VYSSS
DEG_SPOP_SBC_1
0.2778
p.T490M
TCGA-CM-4750
COAD
TCGA
VYSSS
DEG_SPOP_SBC_1
0.2778
p.T490M
DO8192
COAD
ICGC
VYSSS
DEG_SPOP_SBC_1
0.2778
p.T490M
DO9298
COAD
ICGC
VYSSS
DEG_SPOP_SBC_1
0.2778
p.P478S
TCGA-AD-6889
COAD
TCGA
VYSSS
DEG_SPOP_SBC_1
0.1667
p.P478S
DO8463
COAD
ICGC
VYSSS
DEG_SPOP_SBC_1
0.1667
p.S479N
TCGA-AP-A059
UCEC
TCGA
VYSSS
DEG_SPOP_SBC_1
0.1944
p.S479N
DO41361
UCEC
ICGC
VYSSS
DEG_SPOP_SBC_1
0.1944
p.V482F
DO229009
LICA
ICGC
VYSSS
DEG_SPOP_SBC_1
0.2778
p.V482I
DO222521
MELA
ICGC
VYSSS
DEG_SPOP_SBC_1
0.2778
p.D498H
SIDM01070
Non-Small Cell Lung Carcinoma
GDSC
VYSSS
DEG_SPOP_SBC_1
0.0556
p.D498H
ACH-000840
Lung Cancer
CCLE
VYSSS
DEG_SPOP_SBC_1
0.0556
p.D498H
HCC-366
lung
COSMIC
VYSSS
DEG_SPOP_SBC_1
0.0556
p.K483N
ACH-002287
Colon/Colorectal Cancer
CCLE
VYSSS
DEG_SPOP_SBC_1
0.3056
p.K483N
NCI-H630
large_intestine
COSMIC
VYSSS
DEG_SPOP_SBC_1
0.3056
p.V494I
COLO-792
skin
COSMIC
VYSSS
DEG_SPOP_SBC_1
0.1667
p.A489V
KALS-1
central_nervous_system
COSMIC
VYSSS
DEG_SPOP_SBC_1
0.3056
p.L491M
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
VYSSS
DEG_SPOP_SBC_1
0.25
p.D487H
HCC-366
lung
COSMIC
VYSSS
DEG_SPOP_SBC_1
0.7688
Drug responses associated with UNC5B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60307
Microtubule-associated serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
707:711
VYSSS
SPOP
0.9777
More...
O75494
Serine/arginine-rich splicing factor 10
DEG_SPOP_SBC_1
104:108
VYSSS
SPOP
0.9991
More...
O75694
Nuclear pore complex protein Nup155
DEG_SPOP_SBC_1
602:606
VYSSS
SPOP
0.7963
More...
Q8IZJ1
Netrin receptor UNC5B
DEG_SPOP_SBC_1
484:488
VYSSS
SPOP
0.9604
More...
Q92753
Nuclear receptor ROR-beta
DEG_SPOP_SBC_1
132:136
VYSSS
SPOP
0.5622
More...
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SPOP_SBC_1
62:66
VYSSS
SPOP
0.9965
More...
Q9UID3
Vacuolar protein sorting-associated protein 51 homolog
DEG_SPOP_SBC_1
650:654
VYSSS
SPOP
0.9994
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
1303:1307
VYSSS
SPOP
0.6435
More...
Q5TZJ5
Spermatogenesis-associated protein 31A1
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.6282
More...
Q8IWB4
Spermatogenesis-associated protein 31A7
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.9981
More...
Q5VU36
Spermatogenesis-associated protein 31A5
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.9754
More...
Q5VVP1
Spermatogenesis-associated protein 31A6
DEG_SPOP_SBC_1
1195:1199
VYSSS
SPOP
0.982
More...
Q5VYP0
Spermatogenesis-associated protein 31A3
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.6896
More...