DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VYSSS
Uniprot ID:
Q5VVP1
Source protein:
Spermatogenesis-associated protein 31A6
Source gene:
SPATA31A6
Class:
DEG_SPOP_SBC_1
Location:
1195:1199
E3 ligase:
SPOP
DEGRON score:
0.982
ASA_SCORE:
78.94
COIL:
0.7484
CONS_SCORE:
0.2805
DSS_SCORE:
0.3298
HELIX:
0.1222
FCONS_SCORE:
0.6364
RIG_SCORE:
0.7625
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1207K
TCGA-17-Z061
LUAD
TCGA
VYSSS
DEG_SPOP_SBC_1
0.1111
p.C1194Y
TCGA-50-5933
LUAD
TCGA
VYSSS
DEG_SPOP_SBC_1
0.3056
p.C1194Y
DO24800
LUAD
ICGC
VYSSS
DEG_SPOP_SBC_1
0.3056
p.M1206I
TCGA-BR-7723
STAD
TCGA
VYSSS
DEG_SPOP_SBC_1
0.1389
p.M1206I
DO38875
STAD
ICGC
VYSSS
DEG_SPOP_SBC_1
0.1389
p.T1207M
TCGA-CH-5769
PRAD
TCGA
VYSSS
DEG_SPOP_SBC_1
0.1111
p.T1207M
DO36245
PRAD
ICGC
VYSSS
DEG_SPOP_SBC_1
0.1111
p.K1190E
SIDM00625
Other Sarcomas
GDSC
VYSSS
DEG_SPOP_SBC_1
0.3056
p.K1190E
SIDM01758
B-Cell Non-Hodgkin's Lymphoma
GDSC
VYSSS
DEG_SPOP_SBC_1
0.3056
p.E1201K
SIDM01090
Colorectal Carcinoma
GDSC
VYSSS
DEG_SPOP_SBC_1
0.2778
p.K1187Q
SIDM00193
Colorectal Carcinoma
GDSC
VYSSS
DEG_SPOP_SBC_1
0.2222
p.Q1203R
SIDM01608
Endometrial Carcinoma
GDSC
VYSSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with SPATA31A6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60307
Microtubule-associated serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
707:711
VYSSS
SPOP
0.9777
More...
O75494
Serine/arginine-rich splicing factor 10
DEG_SPOP_SBC_1
104:108
VYSSS
SPOP
0.9991
More...
O75694
Nuclear pore complex protein Nup155
DEG_SPOP_SBC_1
602:606
VYSSS
SPOP
0.7963
More...
Q8IZJ1
Netrin receptor UNC5B
DEG_SPOP_SBC_1
484:488
VYSSS
SPOP
0.9604
More...
Q92753
Nuclear receptor ROR-beta
DEG_SPOP_SBC_1
132:136
VYSSS
SPOP
0.5622
More...
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SPOP_SBC_1
62:66
VYSSS
SPOP
0.9965
More...
Q9UID3
Vacuolar protein sorting-associated protein 51 homolog
DEG_SPOP_SBC_1
650:654
VYSSS
SPOP
0.9994
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
1303:1307
VYSSS
SPOP
0.6435
More...
Q5TZJ5
Spermatogenesis-associated protein 31A1
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.6282
More...
Q8IWB4
Spermatogenesis-associated protein 31A7
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.9981
More...
Q5VU36
Spermatogenesis-associated protein 31A5
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.9754
More...
Q5VVP1
Spermatogenesis-associated protein 31A6
DEG_SPOP_SBC_1
1195:1199
VYSSS
SPOP
0.982
More...
Q5VYP0
Spermatogenesis-associated protein 31A3
DEG_SPOP_SBC_1
1199:1203
VYSSS
SPOP
0.6896
More...