Search results: The pahtway p3539 has 70 genes in the original annotation. Currently, there are 44 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
118980SFXN2-sideroflexin 210q24.32CV:PGCnp
LK:YES
55343SLC35C1CDG2C | FUCT1solute carrier family 35 member C111p11.2CV:PGCnp
DMG:Jaffe_2016
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
83759RBM4BRBM30 | RBM4L | ZCCHC15 | ZCCHC21B | ZCRB3BRNA binding motif protein 4B11q13CV:PGCnp
8693GALNT4GALNAC-T4 | GALNACT4polypeptide N-acetylgalactosaminyltransferase 412q21.33CV:PGCnp
DNM:Ambalavanan_2016
8437RASAL1RASALRAS protein activator like 112q23-q24CV:GWASdb
CV:PGCnp
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
59341TRPV4BCYM3 | CMT2C | HMSN2C | OTRPC4 | SMAL | SPSMA | SSQTL1 | TRP12 | VRL2 | VROACtransient receptor potential cation channel subfamily V member 412q24.1CV:PGCnp
Network
9985REC8HR21spB | REC8L1 | Rec8pREC8 meiotic recombination protein14q12CV:PGCnp
GSMA_I
PMID:cooccur
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
3306HSPA2HSP70-2 | HSP70-3heat shock protein family A (Hsp70) member 214q24.1CV:PGCnp
PMID:cooccur
CompositeSet
51466EVLRNB6Enah/Vasp-like14q32.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
730153NPIP-nuclear pore complex interacting protein family, member A1 pseudogene16p11.2GSMA_IIE
83723FAM57BFP1188family with sequence similarity 57 member B16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
29948OSGIN1BDGI | OKL38oxidative stress induced growth inhibitor 116q23.3CV:PGCnp
DMG:Wockner_2014
9955HS3ST3A13-OST-3A | 3OST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A117p12CV:GWASdb
CV:PGCnp
51195RAPGEFL1Link-GEFIIRap guanine nucleotide exchange factor like 117q21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
8714ABCC3ABC31 | EST90757 | MLP2 | MOAT-D | MRP3 | cMOAT2ATP binding cassette subfamily C member 317q22CV:PGCnp
DNM:McCarthy_2014
4616GADD45BGADD45BETA | MYD118growth arrest and DNA damage inducible beta19p13.3CV:PGCnp
PMID:cooccur
828CAPSCAPS1calcyphosine19p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1050CEBPAC/EBP-alpha | CEBPCCAAT/enhancer binding protein alpha19q13.1CV:PGCnp
4680CEACAM6CD66c | CEAL | NCAcarcinoembryonic antigen related cell adhesion molecule 619q13.2CV:PGCnp
PMID:cooccur
5653KLK6Bssp | Klk7 | PRSS18 | PRSS9 | SP59 | hK6kallikrein related peptidase 619q13.3CV:PGCnp
GO_Annotation
PMID:cooccur
5738PTGFRNCD315 | CD9P-1 | EWI-F | FPRP | SMAP-6prostaglandin F2 receptor inhibitor1p13.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
85028SNHG12ASLNC04080 | C1orf79 | LINC00100 | NCRNA00100small nucleolar RNA host gene 121p35.3CV:PGCnp
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
655BMP7OP-1bone morphogenetic protein 720q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
7033TFF3ITF | P1B | TFItrefoil factor 321q22.3CV:PGCnp
PMID:cooccur
5413SEPT5CDCREL | CDCREL-1 | CDCREL1 | H5 | HCDCREL-1 | PNUTL1septin 522q11.21CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
2812GP1BBBDPLT1 | BS | CD42C | GPIBB | GPIbbetaglycoprotein Ib platelet beta subunit22q11.21CNV:YES
GSMA_I
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
25953PNKDBRP17 | DYT8 | FKSG19 | FPD1 | KIPP1184 | MR-1 | MR1 | PDC | PKND1 | TAHCCP2paroxysmal nonkinesigenic dyskinesia2q35CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
9209LRRFIP2HUFI-2leucine rich repeat (in FLII) interacting protein 23p22.2CV:PGCnp
GSMA_I
5021OXTROT-Roxytocin receptor3p25CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
7358UGDHGDH | UDP-GlcDH | UDPGDH | UGDUDP-glucose 6-dehydrogenase4p15.1DMG:Wockner_2014
PMID:cooccur
6286S100PMIG9S100 calcium binding protein P4p16CV:PGCnp
DMG:Jaffe_2016
2261FGFR3ACH | CD333 | CEK2 | HSFGFR3EX | JTK4fibroblast growth factor receptor 34p16.3CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
107ADCY1AC1 | DFNB44adenylate cyclase 1 (brain)7p12.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
155382VPS37DWBSCR24VPS37D, ESCRT-I subunit7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
4034LRCH4LRN | LRRN1 | LRRN4 | PP14183leucine-rich repeats and calponin homology (CH) domain containing 47q22CV:PGCnp
DEG:Maycox_2009
GO_Annotation
55638SYBUGOLSYN | OCSYN | SNPHLsyntabulin8q23.2CV:GWASdb
CV:PGCnp
Network
INTRACELLULAR TRAFFICKING
2934GSNADF | AGELgelsolin9q33CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
9022CLIC3-chloride intracellular channel 39q34.3DMG:Wockner_2014