DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVSST
Uniprot ID:
P10070
Source protein:
Zinc finger protein GLI2
Source gene:
GLI2
Class:
DEG_SPOP_SBC_1
Location:
361:365
E3 ligase:
SPOP
DEGRON score:
0.9871
ASA_SCORE:
86.12
COIL:
0.9024
CONS_SCORE:
0.4548
DSS_SCORE:
0.5628
HELIX:
0.082
FCONS_SCORE:
1.1826
RIG_SCORE:
0.6317
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A370T
TCGA-A2-A1FW
BRCA
TCGA
AVSST
DEG_SPOP_SBC_1
0.1944
p.A370T
DO2002
BRCA
ICGC
AVSST
DEG_SPOP_SBC_1
0.1944
p.A370T
DO233270
GACA
ICGC
AVSST
DEG_SPOP_SBC_1
0.1944
p.R374S
TCGA-D3-A3CE
SKCM
TCGA
AVSST
DEG_SPOP_SBC_1
0.0833
p.R374S
DO37405
SKCM
ICGC
AVSST
DEG_SPOP_SBC_1
0.0833
p.V362I
TCGA-ET-A4KN
THCA
TCGA
AVSST
DEG_SPOP_SBC_1
0.5965
p.V362I
DO39072
THCA
ICGC
AVSST
DEG_SPOP_SBC_1
0.5965
p.A370V
TCGA-VQ-A924
STAD
TCGA
AVSST
DEG_SPOP_SBC_1
0.1944
p.A370V
DO51795
STAD
ICGC
AVSST
DEG_SPOP_SBC_1
0.1944
p.R374C
DO50382
ESAD
ICGC
AVSST
DEG_SPOP_SBC_1
0.0833
p.R374L
SIDM01017
B-Lymphoblastic Leukemia
GDSC
AVSST
DEG_SPOP_SBC_1
0.0833
p.R374L
ACH-002255
Lymphoma
CCLE
AVSST
DEG_SPOP_SBC_1
0.0833
p.R374L
KARPAS-231
haematopoietic_and_lymphoid_tissue
COSMIC
AVSST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with GLI2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10070
Zinc finger protein GLI2
DEG_SPOP_SBC_1
361:365
AVSST
SPOP
0.9871
More...
P10071
Transcriptional activator GLI3
DEG_SPOP_SBC_1
422:426
AVSST
SPOP
0.971
More...
P10914
Interferon regulatory factor 1
DEG_SPOP_SBC_1
187:191
AVSST
SPOP
0.9982
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1756:1760
AVSST
SPOP
0.8694
More...
Q15052
Rho guanine nucleotide exchange factor 6
DEG_SPOP_SBC_1
138:142
AVSST
SPOP
0.9973
More...
Q6AI39
BRD4-interacting chromatin-remodeling complex-associated protein-like
DEG_SPOP_SBC_1
377:381
AVSST
SPOP
0.9866
More...
Q7Z5N4
Protein sidekick-1
DEG_SPOP_SBC_1
1287:1291
AVSST
SPOP
0.6155
More...
Q92547
DNA topoisomerase 2-binding protein 1
DEG_SPOP_SBC_1
1017:1021
AVSST
SPOP
0.9996
More...
Q9BX66
Sorbin and SH3 domain-containing protein 1
DEG_SPOP_SBC_1
266:270
AVSST
SPOP
0.99
More...
Q9GZV5
WW domain-containing transcription regulator protein 1
DEG_SPOP_SBC_1
171:175
AVSST
SPOP
0.9911
More...