DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVSST
Uniprot ID:
Q15052
Source protein:
Rho guanine nucleotide exchange factor 6
Source gene:
ARHGEF6
Class:
DEG_SPOP_SBC_1
Location:
138:142
E3 ligase:
SPOP
DEGRON score:
0.9973
ASA_SCORE:
63.5
COIL:
0.7652
CONS_SCORE:
0.3003
DSS_SCORE:
0.6326
HELIX:
0.0678
FCONS_SCORE:
1.0035
RIG_SCORE:
0.6607
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S131T
TCGA-05-4422
LUAD
TCGA
AVSST
DEG_SPOP_SBC_1
0.5833
p.S131T
DO25907
LUAD
ICGC
AVSST
DEG_SPOP_SBC_1
0.5833
p.A138E
TCGA-73-4670
LUAD
TCGA
AVSST
DEG_SPOP_SBC_1
0.7701
p.A138E
TCGA-Y8-A8S1
KIRP
TCGA
AVSST
DEG_SPOP_SBC_1
0.7701
p.A138E
DO51574
KIRP
ICGC
AVSST
DEG_SPOP_SBC_1
0.7701
p.A138E
DO25350
LUAD
ICGC
AVSST
DEG_SPOP_SBC_1
0.7701
p.Q136H
TCGA-AP-A059
UCEC
TCGA
AVSST
DEG_SPOP_SBC_1
0.2778
p.Q136E
TCGA-AQ-A1H3
BRCA
TCGA
AVSST
DEG_SPOP_SBC_1
0.2778
p.Q136E
DO1668
BRCA
ICGC
AVSST
DEG_SPOP_SBC_1
0.2778
p.G137E
TCGA-CW-5587
KIRC
TCGA
AVSST
DEG_SPOP_SBC_1
0.3056
p.G137E
DO19430
KIRC
ICGC
AVSST
DEG_SPOP_SBC_1
0.3056
p.K151N
TCGA-DX-A48L
SARC
TCGA
AVSST
DEG_SPOP_SBC_1
0.5278
p.K151N
DO219985
SARC
ICGC
AVSST
DEG_SPOP_SBC_1
0.5278
p.L146R
TCGA-EO-A22R
UCEC
TCGA
AVSST
DEG_SPOP_SBC_1
0.2222
p.L146R
DO42713
UCEC
ICGC
AVSST
DEG_SPOP_SBC_1
0.2222
p.N129T
TCGA-ND-A4WC
UCS
TCGA
AVSST
DEG_SPOP_SBC_1
0.0833
p.T152N
DO8240
COAD
ICGC
AVSST
DEG_SPOP_SBC_1
0.0556
p.T133K
DO229022
LICA
ICGC
AVSST
DEG_SPOP_SBC_1
0.6389
p.T144K
DO229031
LICA
ICGC
AVSST
DEG_SPOP_SBC_1
0.7222
p.T142K
DO229041
LICA
ICGC
AVSST
DEG_SPOP_SBC_1
0.7306
p.E136Q
DO29218
OV
ICGC
AVSST
DEG_SPOP_SBC_1
0.2778
p.G133R
DO42256
UCEC
ICGC
AVSST
DEG_SPOP_SBC_1
0.6389
p.L131S
DO41133
UCEC
ICGC
AVSST
DEG_SPOP_SBC_1
0.5833
p.T152I
SIDM01108
Non-Small Cell Lung Carcinoma
GDSC
AVSST
DEG_SPOP_SBC_1
0.0556
p.T152I
ACH-000309
Lung Cancer
CCLE
AVSST
DEG_SPOP_SBC_1
0.0556
p.T152I
SK-LU-1
lung
COSMIC
AVSST
DEG_SPOP_SBC_1
0.0556
p.N129D
ACH-001194
Kidney Cancer
CCLE
AVSST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with ARHGEF6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10070
Zinc finger protein GLI2
DEG_SPOP_SBC_1
361:365
AVSST
SPOP
0.9871
More...
P10071
Transcriptional activator GLI3
DEG_SPOP_SBC_1
422:426
AVSST
SPOP
0.971
More...
P10914
Interferon regulatory factor 1
DEG_SPOP_SBC_1
187:191
AVSST
SPOP
0.9982
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1756:1760
AVSST
SPOP
0.8694
More...
Q15052
Rho guanine nucleotide exchange factor 6
DEG_SPOP_SBC_1
138:142
AVSST
SPOP
0.9973
More...
Q6AI39
BRD4-interacting chromatin-remodeling complex-associated protein-like
DEG_SPOP_SBC_1
377:381
AVSST
SPOP
0.9866
More...
Q7Z5N4
Protein sidekick-1
DEG_SPOP_SBC_1
1287:1291
AVSST
SPOP
0.6155
More...
Q92547
DNA topoisomerase 2-binding protein 1
DEG_SPOP_SBC_1
1017:1021
AVSST
SPOP
0.9996
More...
Q9BX66
Sorbin and SH3 domain-containing protein 1
DEG_SPOP_SBC_1
266:270
AVSST
SPOP
0.99
More...
Q9GZV5
WW domain-containing transcription regulator protein 1
DEG_SPOP_SBC_1
171:175
AVSST
SPOP
0.9911
More...