DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
AVTST
Uniprot ID:
Q8NFC6
Source protein:
Biorientation of chromosomes in cell division protein 1-like 1
Source gene:
BOD1L1
Class:
DEG_SPOP_SBC_1
Location:
1790:1794
E3 ligase:
SPOP
DEGRON score:
0.9943
ASA_SCORE:
79.8
COIL:
0.708
CONS_SCORE:
0.6175
DSS_SCORE:
0.79
HELIX:
0.036
FCONS_SCORE:
1.1478
RIG_SCORE:
0.6848
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1783G
TCGA-05-4382
LUAD
TCGA
AVTST
DEG_SPOP_SBC_1
0.1389
p.D1783G
DO24900
LUAD
ICGC
AVTST
DEG_SPOP_SBC_1
0.1389
p.S1780Y
TCGA-AX-A0J0
UCEC
TCGA
AVTST
DEG_SPOP_SBC_1
0.0556
p.S1780Y
DO41133
UCEC
ICGC
AVTST
DEG_SPOP_SBC_1
0.0556
p.T1794M
TCGA-AX-A2HD
UCEC
TCGA
AVTST
DEG_SPOP_SBC_1
0.7423
p.T1794M
DO42608
UCEC
ICGC
AVTST
DEG_SPOP_SBC_1
0.7423
p.D1783N
TCGA-XF-A9T8
BLCA
TCGA
AVTST
DEG_SPOP_SBC_1
0.1389
p.D1783N
DO51927
BLCA
ICGC
AVTST
DEG_SPOP_SBC_1
0.1389
p.P1803Q
SIDM01220
Glioma
GDSC
AVTST
DEG_SPOP_SBC_1
0.0833
p.P1803Q
ACH-002269
Brain Cancer
CCLE
AVTST
DEG_SPOP_SBC_1
0.0833
p.P1803Q
LNZTA3WT4
central_nervous_system
COSMIC
AVTST
DEG_SPOP_SBC_1
0.0833
p.E1786G
ACH-000982
Colon/Colorectal Cancer
CCLE
AVTST
DEG_SPOP_SBC_1
0.2222
Drug responses associated with BOD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1199:1203
AVTST
SPOP
0.9994
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
252:256
AVTST
SPOP
0.7838
More...
Q15154
Pericentriolar material 1 protein
DEG_SPOP_SBC_1
791:795
AVTST
SPOP
0.996
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1539:1543
AVTST
SPOP
0.9633
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1892:1896
AVTST
SPOP
0.8213
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1790:1794
AVTST
SPOP
0.9943
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
852:856
AVTST
SPOP
0.9732
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1280:1284
AVTST
SPOP
0.9995
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10943:10947
AVTST
SPOP
0.7326
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10997:11001
AVTST
SPOP
0.6888
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11107:11111
AVTST
SPOP
0.8831
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11161:11165
AVTST
SPOP
0.9464
More...
Q9ULR3
Protein phosphatase 1H
DEG_SPOP_SBC_1
109:113
AVTST
SPOP
0.9954
More...
Q9H1U4
Multiple epidermal growth factor-like domains protein 9
DEG_SPOP_SBC_1
353:357
AVTST
SPOP
0.6075
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
253:257
AVTST
SPOP
0.7286
More...