DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTST
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_SPOP_SBC_1
Location:
852:856
E3 ligase:
SPOP
DEGRON score:
0.9732
ASA_SCORE:
84.32
COIL:
0.894
CONS_SCORE:
0.2512
DSS_SCORE:
0.5889
HELIX:
0.0204
FCONS_SCORE:
0.9081
RIG_SCORE:
0.6613
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D844N
TCGA-23-1114
OV
TCGA
AVTST
DEG_SPOP_SBC_1
0.1111
p.L862V
TCGA-50-5066
LUAD
TCGA
AVTST
DEG_SPOP_SBC_1
0.1667
p.L862V
DO25040
LUAD
ICGC
AVTST
DEG_SPOP_SBC_1
0.1667
p.P850R
TCGA-95-7947
LUAD
TCGA
AVTST
DEG_SPOP_SBC_1
0.2778
p.P850R
DO26404
LUAD
ICGC
AVTST
DEG_SPOP_SBC_1
0.2778
p.S861P
TCGA-DF-A2KU
UCEC
TCGA
AVTST
DEG_SPOP_SBC_1
0.1944
p.S861P
DO223286
UCEC
ICGC
AVTST
DEG_SPOP_SBC_1
0.1944
p.S860C
TCGA-E7-A5KF
BLCA
TCGA
AVTST
DEG_SPOP_SBC_1
0.2222
p.S860C
DO44038
BLCA
ICGC
AVTST
DEG_SPOP_SBC_1
0.2222
p.G845E
TCGA-E9-A1NC
BRCA
TCGA
AVTST
DEG_SPOP_SBC_1
0.1389
p.A858V
TCGA-FI-A2D0
UCEC
TCGA
AVTST
DEG_SPOP_SBC_1
0.2778
p.A858V
DO43891
UCEC
ICGC
AVTST
DEG_SPOP_SBC_1
0.2778
p.A858V
ACH-000999
Colon/Colorectal Cancer
CCLE
AVTST
DEG_SPOP_SBC_1
0.2778
p.Q853E
DO26404
LUAD
ICGC
AVTST
DEG_SPOP_SBC_1
0.6744
p.A859V
SIDM00217
Colorectal Carcinoma
GDSC
AVTST
DEG_SPOP_SBC_1
0.25
p.A859V
SNU-1040
large_intestine
COSMIC
AVTST
DEG_SPOP_SBC_1
0.25
p.I847V
M059J
central_nervous_system
COSMIC
AVTST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1199:1203
AVTST
SPOP
0.9994
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
252:256
AVTST
SPOP
0.7838
More...
Q15154
Pericentriolar material 1 protein
DEG_SPOP_SBC_1
791:795
AVTST
SPOP
0.996
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1539:1543
AVTST
SPOP
0.9633
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1892:1896
AVTST
SPOP
0.8213
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1790:1794
AVTST
SPOP
0.9943
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
852:856
AVTST
SPOP
0.9732
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1280:1284
AVTST
SPOP
0.9995
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10943:10947
AVTST
SPOP
0.7326
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10997:11001
AVTST
SPOP
0.6888
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11107:11111
AVTST
SPOP
0.8831
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11161:11165
AVTST
SPOP
0.9464
More...
Q9ULR3
Protein phosphatase 1H
DEG_SPOP_SBC_1
109:113
AVTST
SPOP
0.9954
More...
Q9H1U4
Multiple epidermal growth factor-like domains protein 9
DEG_SPOP_SBC_1
353:357
AVTST
SPOP
0.6075
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
253:257
AVTST
SPOP
0.7286
More...