DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AVTST
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_SPOP_SBC_1
Location:
1280:1284
E3 ligase:
SPOP
DEGRON score:
0.9995
ASA_SCORE:
79.52
COIL:
0.8526
CONS_SCORE:
0.2738
DSS_SCORE:
0.5615
HELIX:
0.0318
FCONS_SCORE:
0.7503
RIG_SCORE:
0.7233
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1281S
TCGA-21-1075
LUSC
TCGA
AVTST
DEG_SPOP_SBC_1
0.7116
p.T1281S
DO26484
LUSC
ICGC
AVTST
DEG_SPOP_SBC_1
0.7116
p.V1280L
TCGA-55-8506
LUAD
TCGA
AVTST
DEG_SPOP_SBC_1
0.6765
p.V1280L
DO45390
LUAD
ICGC
AVTST
DEG_SPOP_SBC_1
0.6765
p.Q1273H
TCGA-E2-A108
BRCA
TCGA
AVTST
DEG_SPOP_SBC_1
0.1389
p.P1278Q
TCGA-EE-A2MM
SKCM
TCGA
AVTST
DEG_SPOP_SBC_1
0.2778
p.P1278Q
DO37770
SKCM
ICGC
AVTST
DEG_SPOP_SBC_1
0.2778
p.A1279T
DO228805
GACA
ICGC
AVTST
DEG_SPOP_SBC_1
0.3056
p.Y1288H
DO228281
MALY
ICGC
AVTST
DEG_SPOP_SBC_1
0.2222
p.S1284A
ACH-000687
Lymphoma
CCLE
AVTST
DEG_SPOP_SBC_1
0.7588
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1199:1203
AVTST
SPOP
0.9994
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
252:256
AVTST
SPOP
0.7838
More...
Q15154
Pericentriolar material 1 protein
DEG_SPOP_SBC_1
791:795
AVTST
SPOP
0.996
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1539:1543
AVTST
SPOP
0.9633
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1892:1896
AVTST
SPOP
0.8213
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1790:1794
AVTST
SPOP
0.9943
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
852:856
AVTST
SPOP
0.9732
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1280:1284
AVTST
SPOP
0.9995
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10943:10947
AVTST
SPOP
0.7326
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10997:11001
AVTST
SPOP
0.6888
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11107:11111
AVTST
SPOP
0.8831
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11161:11165
AVTST
SPOP
0.9464
More...
Q9ULR3
Protein phosphatase 1H
DEG_SPOP_SBC_1
109:113
AVTST
SPOP
0.9954
More...
Q9H1U4
Multiple epidermal growth factor-like domains protein 9
DEG_SPOP_SBC_1
353:357
AVTST
SPOP
0.6075
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
253:257
AVTST
SPOP
0.7286
More...