DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PESTS
Uniprot ID:
C9JH25
Source protein:
Proline-rich transmembrane protein 4
Source gene:
PRRT4
Class:
DEG_SPOP_SBC_1
Location:
129:133
E3 ligase:
SPOP
DEGRON score:
0.9849
ASA_SCORE:
81.78
COIL:
0.895
CONS_SCORE:
0.8155
DSS_SCORE:
0.7246
HELIX:
0.0772
FCONS_SCORE:
1.0883
RIG_SCORE:
0.5979
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P129L
TCGA-2W-A8YY
CESC
TCGA
PESTS
DEG_SPOP_SBC_1
0.7582
p.P129L
DO223732
CESC
ICGC
PESTS
DEG_SPOP_SBC_1
0.7582
p.S125P
TCGA-AP-A1DK
UCEC
TCGA
PESTS
DEG_SPOP_SBC_1
0.2222
p.S125P
DO42033
UCEC
ICGC
PESTS
DEG_SPOP_SBC_1
0.2222
p.R123W
TCGA-AZ-6601
COAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.1667
p.R123W
DO8119
COAD
ICGC
PESTS
DEG_SPOP_SBC_1
0.1667
p.R123Q
TCGA-BG-A18B
UCEC
TCGA
PESTS
DEG_SPOP_SBC_1
0.1667
p.R123Q
TCGA-KH-A6WC
ESCA
TCGA
PESTS
DEG_SPOP_SBC_1
0.1667
p.R123Q
DO41452
UCEC
ICGC
PESTS
DEG_SPOP_SBC_1
0.1667
p.R123Q
SIDM00740
Squamous Cell Lung Carcinoma
GDSC
PESTS
DEG_SPOP_SBC_1
0.1667
p.R123Q
ACH-000747
Lung Cancer
CCLE
PESTS
DEG_SPOP_SBC_1
0.1667
p.R135C
DO230336
COCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.R134Q
DO229013
COCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.R134Q
DO229016
COCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.R134Q
DO230659
LAML
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.R134Q
DO231106
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.R134Q
DO231141
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.R135H
SIDM01307
Colorectal Carcinoma
GDSC
PESTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with PRRT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00221
NF-kappa-B inhibitor epsilon
DEG_SPOP_SBC_1
169:173
PESTS
SPOP
0.9067
More...
P53804
E3 ubiquitin-protein ligase TTC3
DEG_SPOP_SBC_1
1449:1453
PESTS
SPOP
0.7321
More...
P58753
Toll/interleukin-1 receptor domain-containing adapter protein
DEG_SPOP_SBC_1
40:44
PESTS
SPOP
0.9402
More...
P63252
Inward rectifier potassium channel 2
DEG_SPOP_SBC_1
395:399
PESTS
SPOP
0.5469
More...
Q13635
Protein patched homolog 1
DEG_SPOP_SBC_1
702:706
PESTS
SPOP
0.5289
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
621:625
PESTS
SPOP
0.798
More...
Q9BT25
HAUS augmin-like complex subunit 8
DEG_SPOP_SBC_1
127:131
PESTS
SPOP
0.9807
More...
Q9Y4A8
Nuclear factor erythroid 2-related factor 3
DEG_SPOP_SBC_1
507:511
PESTS
SPOP
0.8238
More...
Q8N3X1
Formin-binding protein 4
DEG_SPOP_SBC_1
465:469
PESTS
SPOP
0.9571
More...
C9JH25
Proline-rich transmembrane protein 4
DEG_SPOP_SBC_1
129:133
PESTS
SPOP
0.9849
More...