DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PESTS
Uniprot ID:
P63252
Source protein:
Inward rectifier potassium channel 2
Source gene:
KCNJ2
Class:
DEG_SPOP_SBC_1
Location:
395:399
E3 ligase:
SPOP
DEGRON score:
0.5469
ASA_SCORE:
98.08
COIL:
0.9514
CONS_SCORE:
0.3689
DSS_SCORE:
0.8467
HELIX:
0.0244
FCONS_SCORE:
0.954
RIG_SCORE:
0.5725
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T402R
TCGA-05-4427
LUAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.25
p.T402R
DO23666
LUAD
ICGC
PESTS
DEG_SPOP_SBC_1
0.25
p.P404S
TCGA-90-A4ED
LUSC
TCGA
PESTS
DEG_SPOP_SBC_1
0.1944
p.P404S
DO45482
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.1944
p.S390C
TCGA-95-7039
LUAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.1944
p.S390C
DO23907
LUAD
ICGC
PESTS
DEG_SPOP_SBC_1
0.1944
p.I406T
TCGA-A8-A09R
BRCA
TCGA
PESTS
DEG_SPOP_SBC_1
0.1389
p.I406T
DO3542
BRCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.1389
p.T400M
TCGA-AA-A01Z
COAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.3056
p.T400M
TCGA-AX-A0J1
UCEC
TCGA
PESTS
DEG_SPOP_SBC_1
0.3056
p.T400M
DO8392
COAD
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.T400M
DO233064
GACA
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.T400M
DO41199
UCEC
ICGC
PESTS
DEG_SPOP_SBC_1
0.3056
p.S390N
TCGA-AX-A2HD
UCEC
TCGA
PESTS
DEG_SPOP_SBC_1
0.1944
p.S390N
DO42608
UCEC
ICGC
PESTS
DEG_SPOP_SBC_1
0.1944
p.S390N
ACH-002041
Thyroid Cancer
CCLE
PESTS
DEG_SPOP_SBC_1
0.1944
p.E387K
TCGA-QB-AA9O
SKCM
TCGA
PESTS
DEG_SPOP_SBC_1
0.1111
p.E387K
DO51267
SKCM
ICGC
PESTS
DEG_SPOP_SBC_1
0.1111
p.D407E
SIDM01577
Plasma Cell Myeloma
GDSC
PESTS
DEG_SPOP_SBC_1
0.1111
p.D407E
ACH-000889
Myeloma
CCLE
PESTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with KCNJ2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00221
NF-kappa-B inhibitor epsilon
DEG_SPOP_SBC_1
169:173
PESTS
SPOP
0.9067
More...
P53804
E3 ubiquitin-protein ligase TTC3
DEG_SPOP_SBC_1
1449:1453
PESTS
SPOP
0.7321
More...
P58753
Toll/interleukin-1 receptor domain-containing adapter protein
DEG_SPOP_SBC_1
40:44
PESTS
SPOP
0.9402
More...
P63252
Inward rectifier potassium channel 2
DEG_SPOP_SBC_1
395:399
PESTS
SPOP
0.5469
More...
Q13635
Protein patched homolog 1
DEG_SPOP_SBC_1
702:706
PESTS
SPOP
0.5289
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
621:625
PESTS
SPOP
0.798
More...
Q9BT25
HAUS augmin-like complex subunit 8
DEG_SPOP_SBC_1
127:131
PESTS
SPOP
0.9807
More...
Q9Y4A8
Nuclear factor erythroid 2-related factor 3
DEG_SPOP_SBC_1
507:511
PESTS
SPOP
0.8238
More...
Q8N3X1
Formin-binding protein 4
DEG_SPOP_SBC_1
465:469
PESTS
SPOP
0.9571
More...
C9JH25
Proline-rich transmembrane protein 4
DEG_SPOP_SBC_1
129:133
PESTS
SPOP
0.9849
More...