DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PESTS
Uniprot ID:
P53804
Source protein:
E3 ubiquitin-protein ligase TTC3
Source gene:
TTC3
Class:
DEG_SPOP_SBC_1
Location:
1449:1453
E3 ligase:
SPOP
DEGRON score:
0.7321
ASA_SCORE:
86.56
COIL:
0.8458
CONS_SCORE:
0.3861
DSS_SCORE:
0.3999
HELIX:
0.1118
FCONS_SCORE:
0.951
RIG_SCORE:
0.7525
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H1460Y
TCGA-CF-A47Y
BLCA
TCGA
PESTS
DEG_SPOP_SBC_1
0.1389
p.H1460Y
DO44050
BLCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.1389
p.N1457S
TCGA-CG-5721
STAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.2222
p.N1457S
DO38192
STAD
ICGC
PESTS
DEG_SPOP_SBC_1
0.2222
p.Q1462R
TCGA-DD-A1EE
LIHC
TCGA
PESTS
DEG_SPOP_SBC_1
0.0833
p.Q1462R
TCGA-G3-A25S
LIHC
TCGA
PESTS
DEG_SPOP_SBC_1
0.0833
p.Q1462R
DO23018
LIHC
ICGC
PESTS
DEG_SPOP_SBC_1
0.0833
p.Q1462R
DO22857
LIHC
ICGC
PESTS
DEG_SPOP_SBC_1
0.0833
p.Q1462H
TCGA-DK-AA74
BLCA
TCGA
PESTS
DEG_SPOP_SBC_1
0.0833
p.Q1462H
DO219011
BLCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.0833
p.G1439R
TCGA-FW-A3R5
SKCM
TCGA
PESTS
DEG_SPOP_SBC_1
0.0556
p.G1439R
DO37406
SKCM
ICGC
PESTS
DEG_SPOP_SBC_1
0.0556
p.S1451C
DO23516
LIRI
ICGC
PESTS
DEG_SPOP_SBC_1
0.7541
p.H1460Q
DO230929
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.1389
p.H1460Q
DO224572
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.1389
p.N1442K
DO229253
THCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.1389
p.V1461M
SIDM00995
Other Solid Cancers
GDSC
PESTS
DEG_SPOP_SBC_1
0.1111
p.V1461M
ACH-001328
Skin Cancer
CCLE
PESTS
DEG_SPOP_SBC_1
0.1111
p.V1461M
A431
skin
COSMIC
PESTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with TTC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00221
NF-kappa-B inhibitor epsilon
DEG_SPOP_SBC_1
169:173
PESTS
SPOP
0.9067
More...
P53804
E3 ubiquitin-protein ligase TTC3
DEG_SPOP_SBC_1
1449:1453
PESTS
SPOP
0.7321
More...
P58753
Toll/interleukin-1 receptor domain-containing adapter protein
DEG_SPOP_SBC_1
40:44
PESTS
SPOP
0.9402
More...
P63252
Inward rectifier potassium channel 2
DEG_SPOP_SBC_1
395:399
PESTS
SPOP
0.5469
More...
Q13635
Protein patched homolog 1
DEG_SPOP_SBC_1
702:706
PESTS
SPOP
0.5289
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
621:625
PESTS
SPOP
0.798
More...
Q9BT25
HAUS augmin-like complex subunit 8
DEG_SPOP_SBC_1
127:131
PESTS
SPOP
0.9807
More...
Q9Y4A8
Nuclear factor erythroid 2-related factor 3
DEG_SPOP_SBC_1
507:511
PESTS
SPOP
0.8238
More...
Q8N3X1
Formin-binding protein 4
DEG_SPOP_SBC_1
465:469
PESTS
SPOP
0.9571
More...
C9JH25
Proline-rich transmembrane protein 4
DEG_SPOP_SBC_1
129:133
PESTS
SPOP
0.9849
More...