DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PESTS
Uniprot ID:
O00221
Source protein:
NF-kappa-B inhibitor epsilon
Source gene:
NFKBIE
Class:
DEG_SPOP_SBC_1
Location:
169:173
E3 ligase:
SPOP
DEGRON score:
0.9067
ASA_SCORE:
88.98
COIL:
0.9136
CONS_SCORE:
0.4186
DSS_SCORE:
0.7509
HELIX:
0.0652
FCONS_SCORE:
0.96
RIG_SCORE:
0.5379
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T172A
TCGA-D8-A1XK
BRCA
TCGA
PESTS
DEG_SPOP_SBC_1
0.7139
p.T172A
DO4749
BRCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.7139
p.P175L
DO229003
COCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO229005
COCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO223154
ESCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO229346
LAML
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO229480
LAML
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO230934
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO230990
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO231102
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.P175L
DO231114
LUSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.L162M
DO229221
THCA
ICGC
PESTS
DEG_SPOP_SBC_1
0.1389
p.S171P
ACH-000541
Myeloma
CCLE
PESTS
DEG_SPOP_SBC_1
0.6752
p.S171P
ACH-000672
Lung Cancer
CCLE
PESTS
DEG_SPOP_SBC_1
0.6752
p.R163C
ACH-000990
Endometrial/Uterine Cancer
CCLE
PESTS
DEG_SPOP_SBC_1
0.1667
p.R172Q
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
PESTS
DEG_SPOP_SBC_1
0.7329
Drug responses associated with NFKBIE mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00221
NF-kappa-B inhibitor epsilon
DEG_SPOP_SBC_1
169:173
PESTS
SPOP
0.9067
More...
P53804
E3 ubiquitin-protein ligase TTC3
DEG_SPOP_SBC_1
1449:1453
PESTS
SPOP
0.7321
More...
P58753
Toll/interleukin-1 receptor domain-containing adapter protein
DEG_SPOP_SBC_1
40:44
PESTS
SPOP
0.9402
More...
P63252
Inward rectifier potassium channel 2
DEG_SPOP_SBC_1
395:399
PESTS
SPOP
0.5469
More...
Q13635
Protein patched homolog 1
DEG_SPOP_SBC_1
702:706
PESTS
SPOP
0.5289
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
621:625
PESTS
SPOP
0.798
More...
Q9BT25
HAUS augmin-like complex subunit 8
DEG_SPOP_SBC_1
127:131
PESTS
SPOP
0.9807
More...
Q9Y4A8
Nuclear factor erythroid 2-related factor 3
DEG_SPOP_SBC_1
507:511
PESTS
SPOP
0.8238
More...
Q8N3X1
Formin-binding protein 4
DEG_SPOP_SBC_1
465:469
PESTS
SPOP
0.9571
More...
C9JH25
Proline-rich transmembrane protein 4
DEG_SPOP_SBC_1
129:133
PESTS
SPOP
0.9849
More...