DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PESTS
Uniprot ID:
Q8NG31
Source protein:
Kinetochore scaffold 1
Source gene:
KNL1
Class:
DEG_SPOP_SBC_1
Location:
621:625
E3 ligase:
SPOP
DEGRON score:
0.798
ASA_SCORE:
95.12
COIL:
0.8618
CONS_SCORE:
0.3155
DSS_SCORE:
0.6113
HELIX:
0.1006
FCONS_SCORE:
0.9203
RIG_SCORE:
0.5816
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q611R
SIDM00553
Acute Myeloid Leukemia
GDSC
PESTS
DEG_SPOP_SBC_1
0.0556
p.Q611R
SIDM00333
Endometrial Carcinoma
GDSC
PESTS
DEG_SPOP_SBC_1
0.0556
p.Q611R
SIDM01372
Pancreatic Carcinoma
GDSC
PESTS
DEG_SPOP_SBC_1
0.0556
p.N618S
SIDM00050
Chondrosarcoma
GDSC
PESTS
DEG_SPOP_SBC_1
0.25
p.N618S
SIDM00105
Ovarian Carcinoma
GDSC
PESTS
DEG_SPOP_SBC_1
0.25
p.N618S
SIDM00093
Ovarian Carcinoma
GDSC
PESTS
DEG_SPOP_SBC_1
0.25
p.N618S
OVCAR-3
ovary
COSMIC
PESTS
DEG_SPOP_SBC_1
0.25
p.N618S
CHSA0108
bone
COSMIC
PESTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with KNL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00221
NF-kappa-B inhibitor epsilon
DEG_SPOP_SBC_1
169:173
PESTS
SPOP
0.9067
More...
P53804
E3 ubiquitin-protein ligase TTC3
DEG_SPOP_SBC_1
1449:1453
PESTS
SPOP
0.7321
More...
P58753
Toll/interleukin-1 receptor domain-containing adapter protein
DEG_SPOP_SBC_1
40:44
PESTS
SPOP
0.9402
More...
P63252
Inward rectifier potassium channel 2
DEG_SPOP_SBC_1
395:399
PESTS
SPOP
0.5469
More...
Q13635
Protein patched homolog 1
DEG_SPOP_SBC_1
702:706
PESTS
SPOP
0.5289
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
621:625
PESTS
SPOP
0.798
More...
Q9BT25
HAUS augmin-like complex subunit 8
DEG_SPOP_SBC_1
127:131
PESTS
SPOP
0.9807
More...
Q9Y4A8
Nuclear factor erythroid 2-related factor 3
DEG_SPOP_SBC_1
507:511
PESTS
SPOP
0.8238
More...
Q8N3X1
Formin-binding protein 4
DEG_SPOP_SBC_1
465:469
PESTS
SPOP
0.9571
More...
C9JH25
Proline-rich transmembrane protein 4
DEG_SPOP_SBC_1
129:133
PESTS
SPOP
0.9849
More...