DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PESTS
Uniprot ID:
Q13635
Source protein:
Protein patched homolog 1
Source gene:
PTCH1
Class:
DEG_SPOP_SBC_1
Location:
702:706
E3 ligase:
SPOP
DEGRON score:
0.5289
ASA_SCORE:
71.96
COIL:
0.8116
CONS_SCORE:
0.3144
DSS_SCORE:
0.486
HELIX:
0.1274
FCONS_SCORE:
1.1383
RIG_SCORE:
0.6443
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T693A
TCGA-BR-6452
STAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.0833
p.E703K
TCGA-CK-4951
COAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.591
p.L697I
TCGA-D5-6530
COAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.1944
p.S698I
TCGA-VQ-A8PP
STAD
TCGA
PESTS
DEG_SPOP_SBC_1
0.2222
p.P716T
DO233081
GACA
ICGC
PESTS
DEG_SPOP_SBC_1
0.0556
p.G693R
DO14630
HNSC
ICGC
PESTS
DEG_SPOP_SBC_1
0.0833
p.G696E
DO228667
LICA
ICGC
PESTS
DEG_SPOP_SBC_1
0.1667
p.R704Q
DO42320
UCEC
ICGC
PESTS
DEG_SPOP_SBC_1
0.7329
p.Y700H
DO42977
UCEC
ICGC
PESTS
DEG_SPOP_SBC_1
0.2778
p.D699G
GP5d
large_intestine
COSMIC
PESTS
DEG_SPOP_SBC_1
0.25
p.S698G
NCI-H720
lung
COSMIC
PESTS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with PTCH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00221
NF-kappa-B inhibitor epsilon
DEG_SPOP_SBC_1
169:173
PESTS
SPOP
0.9067
More...
P53804
E3 ubiquitin-protein ligase TTC3
DEG_SPOP_SBC_1
1449:1453
PESTS
SPOP
0.7321
More...
P58753
Toll/interleukin-1 receptor domain-containing adapter protein
DEG_SPOP_SBC_1
40:44
PESTS
SPOP
0.9402
More...
P63252
Inward rectifier potassium channel 2
DEG_SPOP_SBC_1
395:399
PESTS
SPOP
0.5469
More...
Q13635
Protein patched homolog 1
DEG_SPOP_SBC_1
702:706
PESTS
SPOP
0.5289
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
621:625
PESTS
SPOP
0.798
More...
Q9BT25
HAUS augmin-like complex subunit 8
DEG_SPOP_SBC_1
127:131
PESTS
SPOP
0.9807
More...
Q9Y4A8
Nuclear factor erythroid 2-related factor 3
DEG_SPOP_SBC_1
507:511
PESTS
SPOP
0.8238
More...
Q8N3X1
Formin-binding protein 4
DEG_SPOP_SBC_1
465:469
PESTS
SPOP
0.9571
More...
C9JH25
Proline-rich transmembrane protein 4
DEG_SPOP_SBC_1
129:133
PESTS
SPOP
0.9849
More...