DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
PGTTT
Uniprot ID:
O15054
Source protein:
Lysine-specific demethylase 6B
Source gene:
KDM6B
Class:
DEG_SPOP_SBC_1
Location:
394:398
E3 ligase:
SPOP
DEGRON score:
0.9903
ASA_SCORE:
88.4
COIL:
0.9458
CONS_SCORE:
0.4275
DSS_SCORE:
0.73
HELIX:
0.0166
FCONS_SCORE:
1.0357
RIG_SCORE:
0.5622
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S399T
TCGA-85-6560
LUSC
TCGA
PGTTT
DEG_SPOP_SBC_1
0.3056
p.S399T
TCGA-D1-A1O7
UCEC
TCGA
PGTTT
DEG_SPOP_SBC_1
0.3056
p.S399T
DO233259
GACA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.3056
p.S399T
DO26752
LUSC
ICGC
PGTTT
DEG_SPOP_SBC_1
0.3056
p.S399T
DO41139
UCEC
ICGC
PGTTT
DEG_SPOP_SBC_1
0.3056
p.S405G
TCGA-BC-A10W
LIHC
TCGA
PGTTT
DEG_SPOP_SBC_1
0.1389
p.S405G
DO23002
LIHC
ICGC
PGTTT
DEG_SPOP_SBC_1
0.1389
p.S388F
TCGA-FW-A3R5
SKCM
TCGA
PGTTT
DEG_SPOP_SBC_1
0.1667
p.S388F
DO37406
SKCM
ICGC
PGTTT
DEG_SPOP_SBC_1
0.1667
p.T398S
TCGA-HU-A4G8
STAD
TCGA
PGTTT
DEG_SPOP_SBC_1
0.6005
p.T398S
DO47819
STAD
ICGC
PGTTT
DEG_SPOP_SBC_1
0.6005
p.T398S
SIDM01045
Endometrial Carcinoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.6005
p.T398S
ACH-000978
Endometrial/Uterine Cancer
CCLE
PGTTT
DEG_SPOP_SBC_1
0.6005
p.T397S
SIDM00845
Burkitt's Lymphoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.6005
p.A386V
SIDM00454
Rhabdomyosarcoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.1111
p.N407S
SIDM00860
Head and Neck Carcinoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.0833
p.S399I
SIDM00629
Breast Carcinoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.3056
p.G395D
SIDM00217
Colorectal Carcinoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.6087
p.G395D
ACH-000999
Colon/Colorectal Cancer
CCLE
PGTTT
DEG_SPOP_SBC_1
0.6087
p.G395D
SNU-1040
large_intestine
COSMIC
PGTTT
DEG_SPOP_SBC_1
0.6087
p.S406I
SIDM00451
T-Lymphoblastic Leukemia
GDSC
PGTTT
DEG_SPOP_SBC_1
0.5556
p.A386D
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.1111
Drug responses associated with KDM6B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
90:94
PGTTT
SPOP
0.9852
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
394:398
PGTTT
SPOP
0.9903
More...
O75150
E3 ubiquitin-protein ligase BRE1B
DEG_SPOP_SBC_1
568:572
PGTTT
SPOP
0.8754
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
584:588
PGTTT
SPOP
0.6872
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
763:767
PGTTT
SPOP
0.9496
More...
Q13642
Four and a half LIM domains protein 1
DEG_SPOP_SBC_1
311:315
PGTTT
SPOP
0.8812
More...
Q5SQI0
Alpha-tubulin N-acetyltransferase 1
DEG_SPOP_SBC_1
29:33
PGTTT
SPOP
0.5329
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1498:1502
PGTTT
SPOP
0.9082
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2268:2272
PGTTT
SPOP
0.9849
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2825:2829
PGTTT
SPOP
0.8413
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3525:3529
PGTTT
SPOP
0.9452
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4082:4086
PGTTT
SPOP
0.9542
More...
Q96MZ4
Protein FAM218A
DEG_SPOP_SBC_1
63:67
PGTTT
SPOP
0.8498
More...