DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PGTTT
Uniprot ID:
Q96MZ4
Source protein:
Protein FAM218A
Source gene:
FAM218A
Class:
DEG_SPOP_SBC_1
Location:
63:67
E3 ligase:
SPOP
DEGRON score:
0.8498
ASA_SCORE:
53.86
COIL:
0.5746
CONS_SCORE:
0
DSS_SCORE:
0.3955
HELIX:
0.0366
FCONS_SCORE:
0
RIG_SCORE:
0.7456
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L59F
TCGA-64-1676
LUAD
TCGA
PGTTT
DEG_SPOP_SBC_1
0.2222
p.L59F
DO23629
LUAD
ICGC
PGTTT
DEG_SPOP_SBC_1
0.2222
p.V69I
TCGA-D5-6924
COAD
TCGA
PGTTT
DEG_SPOP_SBC_1
0.2778
p.V69I
DO7922
COAD
ICGC
PGTTT
DEG_SPOP_SBC_1
0.2778
p.S77F
TCGA-FR-A726
SKCM
TCGA
PGTTT
DEG_SPOP_SBC_1
0.0556
p.S77F
DO48665
SKCM
ICGC
PGTTT
DEG_SPOP_SBC_1
0.0556
p.L74P
TCGA-XF-A9T3
BLCA
TCGA
PGTTT
DEG_SPOP_SBC_1
0.1389
p.L74P
DO51922
BLCA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.1389
p.H54R
DO229010
COCA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.0833
p.H54R
DO229013
COCA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.0833
p.H54R
DO229016
COCA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.0833
p.H54R
DO229003
COCA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.0833
p.T65M
DO51493
PACA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.7423
p.R53H
SIDM00839
Colorectal Carcinoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.0556
p.R53H
ACH-000950
Colon/Colorectal Cancer
CCLE
PGTTT
DEG_SPOP_SBC_1
0.0556
p.R53H
LoVo
large_intestine
COSMIC
PGTTT
DEG_SPOP_SBC_1
0.0556
Drug responses associated with FAM218A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
90:94
PGTTT
SPOP
0.9852
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
394:398
PGTTT
SPOP
0.9903
More...
O75150
E3 ubiquitin-protein ligase BRE1B
DEG_SPOP_SBC_1
568:572
PGTTT
SPOP
0.8754
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
584:588
PGTTT
SPOP
0.6872
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
763:767
PGTTT
SPOP
0.9496
More...
Q13642
Four and a half LIM domains protein 1
DEG_SPOP_SBC_1
311:315
PGTTT
SPOP
0.8812
More...
Q5SQI0
Alpha-tubulin N-acetyltransferase 1
DEG_SPOP_SBC_1
29:33
PGTTT
SPOP
0.5329
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1498:1502
PGTTT
SPOP
0.9082
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2268:2272
PGTTT
SPOP
0.9849
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2825:2829
PGTTT
SPOP
0.8413
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3525:3529
PGTTT
SPOP
0.9452
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4082:4086
PGTTT
SPOP
0.9542
More...
Q96MZ4
Protein FAM218A
DEG_SPOP_SBC_1
63:67
PGTTT
SPOP
0.8498
More...