DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PGTTT
Uniprot ID:
P51610
Source protein:
Host cell factor 1
Source gene:
HCFC1
Class:
DEG_SPOP_SBC_1
Location:
763:767
E3 ligase:
SPOP
DEGRON score:
0.9496
ASA_SCORE:
86.3
COIL:
0.8758
CONS_SCORE:
0.4495
DSS_SCORE:
0.4889
HELIX:
0.0162
FCONS_SCORE:
0.9503
RIG_SCORE:
0.7501
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T771I
TCGA-23-1121
OV
TCGA
PGTTT
DEG_SPOP_SBC_1
0.6667
p.T771I
DO28731
OV
ICGC
PGTTT
DEG_SPOP_SBC_1
0.6667
p.V756F
TCGA-61-2016
OV
TCGA
PGTTT
DEG_SPOP_SBC_1
0.1389
p.V756F
TCGA-QH-A6CU
LGG
TCGA
PGTTT
DEG_SPOP_SBC_1
0.1389
p.V756F
DO44532
LGG
ICGC
PGTTT
DEG_SPOP_SBC_1
0.1389
p.V756F
DO28461
OV
ICGC
PGTTT
DEG_SPOP_SBC_1
0.1389
p.A776V
TCGA-AA-3947
COAD
TCGA
PGTTT
DEG_SPOP_SBC_1
0.0833
p.A776V
DO8192
COAD
ICGC
PGTTT
DEG_SPOP_SBC_1
0.0833
p.G764S
TCGA-EY-A2OM
UCEC
TCGA
PGTTT
DEG_SPOP_SBC_1
0.5882
p.G764S
DO43025
UCEC
ICGC
PGTTT
DEG_SPOP_SBC_1
0.5882
p.V756I
DO52450
COCA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.1389
p.M774I
DO228912
LICA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.1389
p.S754R
DO229022
LICA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.0833
p.S755R
DO229022
LICA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.5556
p.P763L
DO218906
SKCA
ICGC
PGTTT
DEG_SPOP_SBC_1
0.7582
p.T767A
SIDM00654
Small Cell Lung Carcinoma
GDSC
PGTTT
DEG_SPOP_SBC_1
0.7139
p.T767A
ACH-000866
Lung Cancer
CCLE
PGTTT
DEG_SPOP_SBC_1
0.7139
p.T767A
NCI-H1048
lung
COSMIC
PGTTT
DEG_SPOP_SBC_1
0.7139
Drug responses associated with HCFC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
90:94
PGTTT
SPOP
0.9852
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
394:398
PGTTT
SPOP
0.9903
More...
O75150
E3 ubiquitin-protein ligase BRE1B
DEG_SPOP_SBC_1
568:572
PGTTT
SPOP
0.8754
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
584:588
PGTTT
SPOP
0.6872
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
763:767
PGTTT
SPOP
0.9496
More...
Q13642
Four and a half LIM domains protein 1
DEG_SPOP_SBC_1
311:315
PGTTT
SPOP
0.8812
More...
Q5SQI0
Alpha-tubulin N-acetyltransferase 1
DEG_SPOP_SBC_1
29:33
PGTTT
SPOP
0.5329
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1498:1502
PGTTT
SPOP
0.9082
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2268:2272
PGTTT
SPOP
0.9849
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2825:2829
PGTTT
SPOP
0.8413
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3525:3529
PGTTT
SPOP
0.9452
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4082:4086
PGTTT
SPOP
0.9542
More...
Q96MZ4
Protein FAM218A
DEG_SPOP_SBC_1
63:67
PGTTT
SPOP
0.8498
More...