DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PISST
Uniprot ID:
Q9HBT6
Source protein:
Cadherin-20
Source gene:
CDH20
Class:
DEG_SPOP_SBC_1
Location:
288:292
E3 ligase:
SPOP
DEGRON score:
0.5806
ASA_SCORE:
66.8
COIL:
0.7618
CONS_SCORE:
0.7715
DSS_SCORE:
0.2519
HELIX:
0.0098
FCONS_SCORE:
1.0144
RIG_SCORE:
0.7167
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D300Y
DO229024
LICA
ICGC
PISST
DEG_SPOP_SBC_1
0.1111
p.M281I
DO27919
ORCA
ICGC
PISST
DEG_SPOP_SBC_1
0.1389
p.D300N
SIDM00081
Melanoma
GDSC
PISST
DEG_SPOP_SBC_1
0.1111
p.D300N
ACH-000615
Skin Cancer
CCLE
PISST
DEG_SPOP_SBC_1
0.1111
p.D300N
SK-MEL-28
skin
COSMIC
PISST
DEG_SPOP_SBC_1
0.1111
Drug responses associated with CDH20 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PISST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P26436
Acrosomal protein SP-10
DEG_SPOP_SBC_1
178:182
PISST
SPOP
0.9783
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2808:2812
PISST
SPOP
0.8491
More...
Q08050
Forkhead box protein M1
DEG_SPOP_SBC_1
607:611
PISST
SPOP
0.9828
More...
Q08AE8
Protein spire homolog 1
DEG_SPOP_SBC_1
505:509
PISST
SPOP
0.9941
More...
Q6W4X9
Mucin-6
DEG_SPOP_SBC_1
1808:1812
PISST
SPOP
0.6975
More...
Q8IW35
Centrosomal protein of 97 kDa
DEG_SPOP_SBC_1
655:659
PISST
SPOP
0.9197
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7110:7114
PISST
SPOP
0.7163
More...
Q99935
Opiorphin prepropeptide
DEG_SPOP_SBC_1
181:185
PISST
SPOP
0.9979
More...
Q9H5Z6
Protein FAM124B
DEG_SPOP_SBC_1
225:229
PISST
SPOP
0.5377
More...
Q9HBT6
Cadherin-20
DEG_SPOP_SBC_1
288:292
PISST
SPOP
0.5806
More...
O95873
Uncharacterized protein C6orf47
DEG_SPOP_SBC_1
96:100
PISST
SPOP
0.9778
More...