DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPFY
Uniprot ID:
P78563
Source protein:
Double-stranded RNA-specific editase 1
Source gene:
ADARB1
Class:
ITCH
Location:
188:191
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9978
ASA_SCORE:
62.625
COIL:
0.7988
CONS_SCORE:
0.443
DSS_SCORE:
0.6259
HELIX:
0.0545
FCONS_SCORE:
1.0476
RIG_SCORE:
0.7425
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P183S
TCGA-A5-A0G2
UCEC
TCGA
PPFY
ITCH
0.1944
p.P183S
DO41235
UCEC
ICGC
PPFY
ITCH
0.1944
p.A186V
TCGA-AA-3947
COAD
TCGA
PPFY
ITCH
0.2778
p.A186V
DO8192
COAD
ICGC
PPFY
ITCH
0.2778
p.A186V
SIDM00526
Chronic Myelogenous Leukemia
GDSC
PPFY
ITCH
0.2778
p.A186V
SIDM00316
Glioblastoma
GDSC
PPFY
ITCH
0.2778
p.A186V
SIDM01622
Breast Carcinoma
GDSC
PPFY
ITCH
0.2778
p.A186V
SIDM00171
Colorectal Carcinoma
GDSC
PPFY
ITCH
0.2778
p.A186V
MEG-01
haematopoietic_and_lymphoid_tissue
COSMIC
PPFY
ITCH
0.2778
p.A186V
YH-13
central_nervous_system
COSMIC
PPFY
ITCH
0.2778
p.P183L
TCGA-AP-A1DK
UCEC
TCGA
PPFY
ITCH
0.1944
p.P183L
DO42033
UCEC
ICGC
PPFY
ITCH
0.1944
p.G196V
TCGA-DU-7298
LGG
TCGA
PPFY
ITCH
0.1944
p.G196V
DO22679
LGG
ICGC
PPFY
ITCH
0.1944
p.P189S
TCGA-FS-A1ZK
SKCM
TCGA
PPFY
ITCH
0.6752
p.P189S
DO222837
MELA
ICGC
PPFY
ITCH
0.6752
p.P189S
DO37474
SKCM
ICGC
PPFY
ITCH
0.6752
p.P188S
DO227709
COCA
ICGC
PPFY
ITCH
0.6752
p.G179C
DO229006
LICA
ICGC
PPFY
ITCH
0.0833
Drug responses associated with ADARB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPFY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17643
5,6-dihydroxyindole-2-carboxylic acid oxidase
ITCH
345:348
PPFY
ITCH,NEDD4
0.695
More...
P18583
Protein SON
ITCH
2136:2139
PPFY
ITCH,NEDD4
0.9982
More...
P78563
Double-stranded RNA-specific editase 1
ITCH
188:191
PPFY
ITCH,NEDD4
0.9978
More...
Q16644
MAP kinase-activated protein kinase 3
ITCH
240:243
PPFY
ITCH,NEDD4
0.6619
More...
Q5TBA9
Protein furry homolog
ITCH
1514:1517
PPFY
ITCH,NEDD4
0.7858
More...
Q5VTD9
Zinc finger protein Gfi-1b
ITCH
99:102
PPFY
ITCH,NEDD4
0.9889
More...
Q5VYJ5
MAM and LDL-receptor class A domain-containing protein 1
ITCH
103:106
PPFY
ITCH,NEDD4
0.6037
More...
Q6ZN30
Zinc finger protein basonuclin-2
ITCH
570:573
PPFY
ITCH,NEDD4
0.7924
More...
Q8IW41
MAP kinase-activated protein kinase 5
ITCH
239:242
PPFY
ITCH,NEDD4
0.887
More...
Q9UPX0
Protein turtle homolog B
ITCH
981:984
PPFY
ITCH,NEDD4
0.9332
More...
Q6ZTI6
Refilin-A
ITCH
38:41
PPFY
ITCH,NEDD4
0.9921
More...
Q7Z2T5
TRMT1-like protein
ITCH
632:635
PPFY
ITCH,NEDD4
0.8239
More...
A4D0V7
Cadherin-like and PC-esterase domain-containing protein 1
ITCH
104:107
PPFY
ITCH,NEDD4
0.9116
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
ITCH
4949:4952
PPFY
ITCH,NEDD4
0.8101
More...