DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRSST
Uniprot ID:
A6H8Y1
Source protein:
Transcription factor TFIIIB component B'' homolog
Source gene:
BDP1
Class:
DEG_SPOP_SBC_1
Location:
68:72
E3 ligase:
SPOP
DEGRON score:
0.9128
ASA_SCORE:
96.06
COIL:
0.9196
CONS_SCORE:
0.3124
DSS_SCORE:
0.821
HELIX:
0.0462
FCONS_SCORE:
0.8547
RIG_SCORE:
0.5857
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E65D
TCGA-06-1802
GBM
TCGA
PRSST
DEG_SPOP_SBC_1
0.25
p.E65D
DO12100
GBM
ICGC
PRSST
DEG_SPOP_SBC_1
0.25
p.D80Y
TCGA-A5-A2K5
UCEC
TCGA
PRSST
DEG_SPOP_SBC_1
0.1111
p.D80Y
DO41379
UCEC
ICGC
PRSST
DEG_SPOP_SBC_1
0.1111
p.S71I
TCGA-BF-A1PZ
SKCM
TCGA
PRSST
DEG_SPOP_SBC_1
0.7341
p.M59I
DO7962
COAD
ICGC
PRSST
DEG_SPOP_SBC_1
0.0833
p.M59V
DO23210
LINC
ICGC
PRSST
DEG_SPOP_SBC_1
0.0833
p.M59V
DO23274
LINC
ICGC
PRSST
DEG_SPOP_SBC_1
0.0833
p.E63Q
DO27074
LUSC
ICGC
PRSST
DEG_SPOP_SBC_1
0.1944
p.P82Q
DO50279
SKCM
ICGC
PRSST
DEG_SPOP_SBC_1
0.0556
p.P69Q
DO47636
SKCM
ICGC
PRSST
DEG_SPOP_SBC_1
0.7035
p.V77A
DO229272
THCA
ICGC
PRSST
DEG_SPOP_SBC_1
0.1944
p.P69A
DO40526
THCA
ICGC
PRSST
DEG_SPOP_SBC_1
0.7503
p.S71N
SIDM00516
Melanoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.7069
p.S71N
MZ7-mel
skin
COSMIC
PRSST
DEG_SPOP_SBC_1
0.7069
p.E65K
SIDM00158
Glioblastoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.25
p.E62K
SIDM00500
Colorectal Carcinoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.1667
p.E62K
ACH-000959
Colon/Colorectal Cancer
CCLE
PRSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with BDP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0JNW5
UHRF1-binding protein 1-like
DEG_SPOP_SBC_1
1328:1332
PRSST
SPOP
0.9595
More...
A6H8Y1
Transcription factor TFIIIB component B'' homolog
DEG_SPOP_SBC_1
68:72
PRSST
SPOP
0.9128
More...
O00512
B-cell CLL/lymphoma 9 protein
DEG_SPOP_SBC_1
151:155
PRSST
SPOP
0.9984
More...
O94915
Protein furry homolog-like
DEG_SPOP_SBC_1
97:101
PRSST
SPOP
0.926
More...
O94929
Actin-binding LIM protein 3
DEG_SPOP_SBC_1
545:549
PRSST
SPOP
0.9681
More...
P48764
Sodium/hydrogen exchanger 3
DEG_SPOP_SBC_1
574:578
PRSST
SPOP
0.807
More...
Q8IZP1
TBC1 domain family member 3
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q8TD19
Serine/threonine-protein kinase Nek9
DEG_SPOP_SBC_1
329:333
PRSST
SPOP
0.8086
More...
Q8WTW3
Conserved oligomeric Golgi complex subunit 1
DEG_SPOP_SBC_1
888:892
PRSST
SPOP
0.8806
More...
Q6DHY5
TBC1 domain family member 3G
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q9Y5G5
Protocadherin gamma-A8
DEG_SPOP_SBC_1
221:225
PRSST
SPOP
0.8172
More...
A6NDS4
TBC1 domain family member 3B
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
A6NER0
TBC1 domain family member 3F
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
P0C7X1
TBC1 domain family member 3H
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q6IPX1
TBC1 domain family member 3C
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9745
More...
Q9NVM1
Protein eva-1 homolog B
DEG_SPOP_SBC_1
68:72
PRSST
SPOP
0.6927
More...
Q96KW2
POM121-like protein 2
DEG_SPOP_SBC_1
714:718
PRSST
SPOP
0.764
More...