DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PRSST
Uniprot ID:
O94929
Source protein:
Actin-binding LIM protein 3
Source gene:
ABLIM3
Class:
DEG_SPOP_SBC_1
Location:
545:549
E3 ligase:
SPOP
DEGRON score:
0.9681
ASA_SCORE:
82.78
COIL:
0.8948
CONS_SCORE:
0.6267
DSS_SCORE:
0.5676
HELIX:
0.0724
FCONS_SCORE:
1.3193
RIG_SCORE:
0.6043
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S547R
TCGA-24-2290
OV
TCGA
PRSST
DEG_SPOP_SBC_1
0.7427
p.S547R
DO30090
OV
ICGC
PRSST
DEG_SPOP_SBC_1
0.7427
p.H556L
TCGA-D5-6532
COAD
TCGA
PRSST
DEG_SPOP_SBC_1
0.1389
p.R552W
TCGA-DU-6392
LGG
TCGA
PRSST
DEG_SPOP_SBC_1
0.25
p.S548F
TCGA-FW-A3R5
SKCM
TCGA
PRSST
DEG_SPOP_SBC_1
0.7982
p.S548F
DO37406
SKCM
ICGC
PRSST
DEG_SPOP_SBC_1
0.7982
p.R546Q
TCGA-HU-A4H5
STAD
TCGA
PRSST
DEG_SPOP_SBC_1
0.6218
p.R546Q
TCGA-ZB-A966
THYM
TCGA
PRSST
DEG_SPOP_SBC_1
0.6218
p.R546Q
DO222454
BTCA
ICGC
PRSST
DEG_SPOP_SBC_1
0.6218
p.R546Q
DO50384
ESAD
ICGC
PRSST
DEG_SPOP_SBC_1
0.6218
p.R546Q
DO47727
STAD
ICGC
PRSST
DEG_SPOP_SBC_1
0.6218
p.R546Q
SIDM01301
Esophageal Carcinoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.6218
p.E553K
SIDM00963
Breast Carcinoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.2222
p.E553K
ACH-000927
Breast Cancer
CCLE
PRSST
DEG_SPOP_SBC_1
0.2222
p.E553K
BT-474
breast
COSMIC
PRSST
DEG_SPOP_SBC_1
0.2222
p.L540M
LXF-289
lung
COSMIC
PRSST
DEG_SPOP_SBC_1
0.1944
p.R557Q
K2
skin
COSMIC
PRSST
DEG_SPOP_SBC_1
0.1111
p.N539S
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PRSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with ABLIM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0JNW5
UHRF1-binding protein 1-like
DEG_SPOP_SBC_1
1328:1332
PRSST
SPOP
0.9595
More...
A6H8Y1
Transcription factor TFIIIB component B'' homolog
DEG_SPOP_SBC_1
68:72
PRSST
SPOP
0.9128
More...
O00512
B-cell CLL/lymphoma 9 protein
DEG_SPOP_SBC_1
151:155
PRSST
SPOP
0.9984
More...
O94915
Protein furry homolog-like
DEG_SPOP_SBC_1
97:101
PRSST
SPOP
0.926
More...
O94929
Actin-binding LIM protein 3
DEG_SPOP_SBC_1
545:549
PRSST
SPOP
0.9681
More...
P48764
Sodium/hydrogen exchanger 3
DEG_SPOP_SBC_1
574:578
PRSST
SPOP
0.807
More...
Q8IZP1
TBC1 domain family member 3
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q8TD19
Serine/threonine-protein kinase Nek9
DEG_SPOP_SBC_1
329:333
PRSST
SPOP
0.8086
More...
Q8WTW3
Conserved oligomeric Golgi complex subunit 1
DEG_SPOP_SBC_1
888:892
PRSST
SPOP
0.8806
More...
Q6DHY5
TBC1 domain family member 3G
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q9Y5G5
Protocadherin gamma-A8
DEG_SPOP_SBC_1
221:225
PRSST
SPOP
0.8172
More...
A6NDS4
TBC1 domain family member 3B
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
A6NER0
TBC1 domain family member 3F
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
P0C7X1
TBC1 domain family member 3H
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q6IPX1
TBC1 domain family member 3C
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9745
More...
Q9NVM1
Protein eva-1 homolog B
DEG_SPOP_SBC_1
68:72
PRSST
SPOP
0.6927
More...
Q96KW2
POM121-like protein 2
DEG_SPOP_SBC_1
714:718
PRSST
SPOP
0.764
More...