DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
PRSST
Uniprot ID:
Q9Y5G5
Source protein:
Protocadherin gamma-A8
Source gene:
PCDHGA8
Class:
DEG_SPOP_SBC_1
Location:
221:225
E3 ligase:
SPOP
DEGRON score:
0.8172
ASA_SCORE:
66.86
COIL:
0.42
CONS_SCORE:
0.5533
DSS_SCORE:
0.5036
HELIX:
0.0086
FCONS_SCORE:
0.751
RIG_SCORE:
0.6192
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R222C
TCGA-06-5416
GBM
TCGA
PRSST
DEG_SPOP_SBC_1
0.719
p.R222C
DO10880
GBM
ICGC
PRSST
DEG_SPOP_SBC_1
0.719
p.R227H
TCGA-38-4629
LUAD
TCGA
PRSST
DEG_SPOP_SBC_1
0.2778
p.R227H
TCGA-86-A4JF
LUAD
TCGA
PRSST
DEG_SPOP_SBC_1
0.2778
p.R227H
DO23771
LUAD
ICGC
PRSST
DEG_SPOP_SBC_1
0.2778
p.R227H
DO45317
LUAD
ICGC
PRSST
DEG_SPOP_SBC_1
0.2778
p.R227H
ACH-001197
Lymphoma
CCLE
PRSST
DEG_SPOP_SBC_1
0.2778
p.R227C
TCGA-AX-A0J1
UCEC
TCGA
PRSST
DEG_SPOP_SBC_1
0.2778
p.R227C
DO41199
UCEC
ICGC
PRSST
DEG_SPOP_SBC_1
0.2778
p.V230M
TCGA-CG-4436
STAD
TCGA
PRSST
DEG_SPOP_SBC_1
0.1944
p.V230M
TCGA-DF-A2KZ
UCEC
TCGA
PRSST
DEG_SPOP_SBC_1
0.1944
p.V230M
DO38320
STAD
ICGC
PRSST
DEG_SPOP_SBC_1
0.1944
p.V230M
DO52409
UCEC
ICGC
PRSST
DEG_SPOP_SBC_1
0.1944
p.K219T
TCGA-VQ-A91S
STAD
TCGA
PRSST
DEG_SPOP_SBC_1
0.2778
p.K219T
DO222352
STAD
ICGC
PRSST
DEG_SPOP_SBC_1
0.2778
p.A214S
DO229028
LICA
ICGC
PRSST
DEG_SPOP_SBC_1
0.1389
p.T213M
DO228428
MALY
ICGC
PRSST
DEG_SPOP_SBC_1
0.5556
p.A214T
DO219871
SKCA
ICGC
PRSST
DEG_SPOP_SBC_1
0.1389
p.A214T
SIDM00953
Small Cell Lung Carcinoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.1389
p.A214T
CPC-N
lung
COSMIC
PRSST
DEG_SPOP_SBC_1
0.1389
p.P221R
SIDM00756
Non-Small Cell Lung Carcinoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.7512
p.P221R
SIDM00736
Non-Cancerous
GDSC
PRSST
DEG_SPOP_SBC_1
0.7512
p.G218S
SIDM00243
Other Solid Cancers
GDSC
PRSST
DEG_SPOP_SBC_1
0.25
p.G218S
SIDM01659
Kidney Carcinoma
GDSC
PRSST
DEG_SPOP_SBC_1
0.25
p.G218S
ACH-000313
Kidney Cancer
CCLE
PRSST
DEG_SPOP_SBC_1
0.25
p.G218S
ACH-002288
Embryonal Cancer
CCLE
PRSST
DEG_SPOP_SBC_1
0.25
p.G218S
NEC8
testis
COSMIC
PRSST
DEG_SPOP_SBC_1
0.25
p.S223C
ACH-002471
Primary
CCLE
PRSST
DEG_SPOP_SBC_1
0.7541
Drug responses associated with PCDHGA8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0JNW5
UHRF1-binding protein 1-like
DEG_SPOP_SBC_1
1328:1332
PRSST
SPOP
0.9595
More...
A6H8Y1
Transcription factor TFIIIB component B'' homolog
DEG_SPOP_SBC_1
68:72
PRSST
SPOP
0.9128
More...
O00512
B-cell CLL/lymphoma 9 protein
DEG_SPOP_SBC_1
151:155
PRSST
SPOP
0.9984
More...
O94915
Protein furry homolog-like
DEG_SPOP_SBC_1
97:101
PRSST
SPOP
0.926
More...
O94929
Actin-binding LIM protein 3
DEG_SPOP_SBC_1
545:549
PRSST
SPOP
0.9681
More...
P48764
Sodium/hydrogen exchanger 3
DEG_SPOP_SBC_1
574:578
PRSST
SPOP
0.807
More...
Q8IZP1
TBC1 domain family member 3
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q8TD19
Serine/threonine-protein kinase Nek9
DEG_SPOP_SBC_1
329:333
PRSST
SPOP
0.8086
More...
Q8WTW3
Conserved oligomeric Golgi complex subunit 1
DEG_SPOP_SBC_1
888:892
PRSST
SPOP
0.8806
More...
Q6DHY5
TBC1 domain family member 3G
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q9Y5G5
Protocadherin gamma-A8
DEG_SPOP_SBC_1
221:225
PRSST
SPOP
0.8172
More...
A6NDS4
TBC1 domain family member 3B
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
A6NER0
TBC1 domain family member 3F
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
P0C7X1
TBC1 domain family member 3H
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9461
More...
Q6IPX1
TBC1 domain family member 3C
DEG_SPOP_SBC_1
410:414
PRSST
SPOP
0.9745
More...
Q9NVM1
Protein eva-1 homolog B
DEG_SPOP_SBC_1
68:72
PRSST
SPOP
0.6927
More...
Q96KW2
POM121-like protein 2
DEG_SPOP_SBC_1
714:718
PRSST
SPOP
0.764
More...