DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PVSTS
Uniprot ID:
O14974
Source protein:
Protein phosphatase 1 regulatory subunit 12A
Source gene:
PPP1R12A
Class:
DEG_SPOP_SBC_1
Location:
771:775
E3 ligase:
SPOP
DEGRON score:
0.9914
ASA_SCORE:
90.56
COIL:
0.933
CONS_SCORE:
0.3488
DSS_SCORE:
0.5595
HELIX:
0.0354
FCONS_SCORE:
1.103
RIG_SCORE:
0.6598
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q767R
TCGA-63-A5ML
LUSC
TCGA
PVSTS
DEG_SPOP_SBC_1
0.2222
p.Q767R
DO219151
LUSC
ICGC
PVSTS
DEG_SPOP_SBC_1
0.2222
p.T761M
TCGA-B5-A3FC
UCEC
TCGA
PVSTS
DEG_SPOP_SBC_1
0.5
p.T761M
TCGA-D1-A103
UCEC
TCGA
PVSTS
DEG_SPOP_SBC_1
0.5
p.T761M
DO42312
UCEC
ICGC
PVSTS
DEG_SPOP_SBC_1
0.5
p.T761M
DO41871
UCEC
ICGC
PVSTS
DEG_SPOP_SBC_1
0.5
p.R768H
DO229389
BTCA
ICGC
PVSTS
DEG_SPOP_SBC_1
0.25
p.E764K
DO14566
HNSC
ICGC
PVSTS
DEG_SPOP_SBC_1
0.1389
p.P771Q
DO228952
LICA
ICGC
PVSTS
DEG_SPOP_SBC_1
0.7035
p.T765N
DO228974
LICA
ICGC
PVSTS
DEG_SPOP_SBC_1
0.6111
p.P780S
DO220879
MELA
ICGC
PVSTS
DEG_SPOP_SBC_1
0.1944
p.T779A
SIDM00625
Other Sarcomas
GDSC
PVSTS
DEG_SPOP_SBC_1
0.2222
p.T779A
MES-SA
soft_tissue
COSMIC
PVSTS
DEG_SPOP_SBC_1
0.2222
p.Q767H
SIDM00885
Breast Carcinoma
GDSC
PVSTS
DEG_SPOP_SBC_1
0.2222
p.Q767H
ACH-000111
Breast Cancer
CCLE
PVSTS
DEG_SPOP_SBC_1
0.2222
p.Q767H
HCC1187
breast
COSMIC
PVSTS
DEG_SPOP_SBC_1
0.2222
p.R764K
8-MG-BA
central_nervous_system
COSMIC
PVSTS
DEG_SPOP_SBC_1
0.1389
p.R764K
SK-MM-2
haematopoietic_and_lymphoid_tissue
COSMIC
PVSTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with PPP1R12A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L390
Pleckstrin homology domain-containing family G member 3
DEG_SPOP_SBC_1
2:6
PVSTS
SPOP
0.7869
More...
O14836
Tumor necrosis factor receptor superfamily member 13B
DEG_SPOP_SBC_1
219:223
PVSTS
SPOP
0.8996
More...
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
771:775
PVSTS
SPOP
0.9914
More...
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
339:343
PVSTS
SPOP
0.933
More...
P07333
Macrophage colony-stimulating factor 1 receptor
DEG_SPOP_SBC_1
728:732
PVSTS
SPOP
0.9843
More...
P07947
Tyrosine-protein kinase Yes
DEG_SPOP_SBC_1
24:28
PVSTS
SPOP
0.9939
More...
P22105
Tenascin-X
DEG_SPOP_SBC_1
4012:4016
PVSTS
SPOP
0.5207
More...
Q06187
Tyrosine-protein kinase BTK
DEG_SPOP_SBC_1
210:214
PVSTS
SPOP
0.968
More...
Q13492
Phosphatidylinositol-binding clathrin assembly protein
DEG_SPOP_SBC_1
360:364
PVSTS
SPOP
0.9979
More...
Q15911
Zinc finger homeobox protein 3
DEG_SPOP_SBC_1
1654:1658
PVSTS
SPOP
0.91
More...
Q5VWN6
Protein TASOR 2
DEG_SPOP_SBC_1
1095:1099
PVSTS
SPOP
0.9912
More...
Q68CP9
AT-rich interactive domain-containing protein 2
DEG_SPOP_SBC_1
616:620
PVSTS
SPOP
0.991
More...
Q6XZF7
Dynamin-binding protein
DEG_SPOP_SBC_1
618:622
PVSTS
SPOP
0.911
More...
Q8N3J3
Homologous recombination OB-fold protein
DEG_SPOP_SBC_1
103:107
PVSTS
SPOP
0.857
More...
Q8NFM4
Adenylate cyclase type 4
DEG_SPOP_SBC_1
500:504
PVSTS
SPOP
0.7358
More...
Q96JG6
Syndetin
DEG_SPOP_SBC_1
503:507
PVSTS
SPOP
0.9603
More...
Q8N8K9
Uncharacterized protein KIAA1958
DEG_SPOP_SBC_1
311:315
PVSTS
SPOP
0.9956
More...
Q8IZM8
Zinc finger protein 654
DEG_SPOP_SBC_1
911:915
PVSTS
SPOP
0.8934
More...
A6NCI8
Uncharacterized protein C2orf78
DEG_SPOP_SBC_1
261:265
PVSTS
SPOP
0.9843
More...
Q2M3A8
Putative uncharacterized protein MRGPRG-AS1
DEG_SPOP_SBC_1
84:88
PVSTS
SPOP
0.9694
More...