DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VLTST
Uniprot ID:
P54132
Source protein:
Bloom syndrome protein
Source gene:
BLM
Class:
DEG_SPOP_SBC_1
Location:
524:528
E3 ligase:
SPOP
DEGRON score:
0.9878
ASA_SCORE:
66.4
COIL:
0.7358
CONS_SCORE:
0.202
DSS_SCORE:
0.4614
HELIX:
0.0954
FCONS_SCORE:
0.9429
RIG_SCORE:
0.7424
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K535Q
TCGA-B0-5710
KIRC
TCGA
VLTST
DEG_SPOP_SBC_1
0.5833
p.K535Q
DO16308
KIRC
ICGC
VLTST
DEG_SPOP_SBC_1
0.5833
p.T526P
DO48413
BLCA
ICGC
VLTST
DEG_SPOP_SBC_1
0.7031
p.Y519C
DO44788
LICA
ICGC
VLTST
DEG_SPOP_SBC_1
0.1944
p.V530E
DO218900
SKCA
ICGC
VLTST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with BLM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
524:528
VLTST
SPOP
0.9878
More...
Q5T1R4
Transcription factor HIVEP3
DEG_SPOP_SBC_1
1471:1475
VLTST
SPOP
0.9481
More...
Q5T8D3
Acyl-CoA-binding domain-containing protein 5
DEG_SPOP_SBC_1
177:181
VLTST
SPOP
0.998
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7808:7812
VLTST
SPOP
0.7921
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9265:9269
VLTST
SPOP
0.9834
More...
Q9H4G0
Band 4.1-like protein 1
DEG_SPOP_SBC_1
791:795
VLTST
SPOP
0.6823
More...
Q9H8V3
Protein ECT2
DEG_SPOP_SBC_1
6:10
VLTST
SPOP
0.9236
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3024:3028
VLTST
SPOP
0.9812
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3053:3057
VLTST
SPOP
0.9787
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3195:3199
VLTST
SPOP
0.8767
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4310:4314
VLTST
SPOP
0.945
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4708:4712
VLTST
SPOP
0.9684
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4737:4741
VLTST
SPOP
0.9525
More...