DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTSS
Uniprot ID:
P31629
Source protein:
Transcription factor HIVEP2
Source gene:
HIVEP2
Class:
DEG_SPOP_SBC_1
Location:
546:550
E3 ligase:
SPOP
DEGRON score:
0.9975
ASA_SCORE:
86.58
COIL:
0.9382
CONS_SCORE:
0.4184
DSS_SCORE:
0.4858
HELIX:
0.0336
FCONS_SCORE:
0.9862
RIG_SCORE:
0.6365
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S559Y
TCGA-AG-A002
READ
TCGA
VPTSS
DEG_SPOP_SBC_1
0.0833
p.S545P
TCGA-B5-A11E
UCEC
TCGA
VPTSS
DEG_SPOP_SBC_1
0.3056
p.S545P
DO41644
UCEC
ICGC
VPTSS
DEG_SPOP_SBC_1
0.3056
p.R542K
TCGA-D3-A51T
SKCM
TCGA
VPTSS
DEG_SPOP_SBC_1
0.2222
p.R542K
DO47389
SKCM
ICGC
VPTSS
DEG_SPOP_SBC_1
0.2222
p.S559F
TCGA-QQ-A5VD
SARC
TCGA
VPTSS
DEG_SPOP_SBC_1
0.0833
p.S559F
DO220252
SARC
ICGC
VPTSS
DEG_SPOP_SBC_1
0.0833
p.S549Y
SIDM00193
Colorectal Carcinoma
GDSC
VPTSS
DEG_SPOP_SBC_1
0.712
p.S549Y
ACH-000991
Colon/Colorectal Cancer
CCLE
VPTSS
DEG_SPOP_SBC_1
0.712
p.S549Y
SNU-81
large_intestine
COSMIC
VPTSS
DEG_SPOP_SBC_1
0.712
Drug responses associated with HIVEP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75038
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2
DEG_SPOP_SBC_1
1022:1026
VPTSS
SPOP
0.7337
More...
O75604
Ubiquitin carboxyl-terminal hydrolase 2
DEG_SPOP_SBC_1
54:58
VPTSS
SPOP
0.9881
More...
O94850
Dendrin
DEG_SPOP_SBC_1
251:255
VPTSS
SPOP
0.9712
More...
P22307
Sterol carrier protein 2
DEG_SPOP_SBC_1
422:426
VPTSS
SPOP
0.6008
More...
P31629
Transcription factor HIVEP2
DEG_SPOP_SBC_1
546:550
VPTSS
SPOP
0.9975
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2863:2867
VPTSS
SPOP
0.9646
More...
Q01973
Inactive tyrosine-protein kinase transmembrane receptor ROR1
DEG_SPOP_SBC_1
41:45
VPTSS
SPOP
0.8246
More...
Q02447
Transcription factor Sp3
DEG_SPOP_SBC_1
331:335
VPTSS
SPOP
0.9924
More...
Q8WWM7
Ataxin-2-like protein
DEG_SPOP_SBC_1
471:475
VPTSS
SPOP
0.9372
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12511:12515
VPTSS
SPOP
0.96
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12667:12671
VPTSS
SPOP
0.9914
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1602:1606
VPTSS
SPOP
0.9498
More...
P60413
Keratin-associated protein 10-12
DEG_SPOP_SBC_1
216:220
VPTSS
SPOP
0.7395
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
927:931
VPTSS
SPOP
0.8818
More...