DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VPTSS
Uniprot ID:
Q01973
Source protein:
Inactive tyrosine-protein kinase transmembrane receptor ROR1
Source gene:
ROR1
Class:
DEG_SPOP_SBC_1
Location:
41:45
E3 ligase:
SPOP
DEGRON score:
0.8246
ASA_SCORE:
64.52
COIL:
0.7652
CONS_SCORE:
0.3136
DSS_SCORE:
0.2562
HELIX:
0.1558
FCONS_SCORE:
1.2044
RIG_SCORE:
0.7446
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V41L
TCGA-13-1481
OV
TCGA
VPTSS
DEG_SPOP_SBC_1
0.6765
p.V41L
DO31789
OV
ICGC
VPTSS
DEG_SPOP_SBC_1
0.6765
p.S49A
TCGA-IB-7651
PAAD
TCGA
VPTSS
DEG_SPOP_SBC_1
0.2222
p.S49A
DO46657
PAAD
ICGC
VPTSS
DEG_SPOP_SBC_1
0.2222
p.Q49K
DO223588
BLCA
ICGC
VPTSS
DEG_SPOP_SBC_1
0.2222
p.G41R
DO10036
COAD
ICGC
VPTSS
DEG_SPOP_SBC_1
0.7568
p.G41R
DO28942
OV
ICGC
VPTSS
DEG_SPOP_SBC_1
0.7568
p.G32W
DO26423
LUSC
ICGC
VPTSS
DEG_SPOP_SBC_1
0.0833
p.G41E
DO222908
MELA
ICGC
VPTSS
DEG_SPOP_SBC_1
0.7199
p.E55G
DO52402
UCEC
ICGC
VPTSS
DEG_SPOP_SBC_1
0.0556
p.R48Q
NCI-H630
large_intestine
COSMIC
VPTSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with ROR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75038
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2
DEG_SPOP_SBC_1
1022:1026
VPTSS
SPOP
0.7337
More...
O75604
Ubiquitin carboxyl-terminal hydrolase 2
DEG_SPOP_SBC_1
54:58
VPTSS
SPOP
0.9881
More...
O94850
Dendrin
DEG_SPOP_SBC_1
251:255
VPTSS
SPOP
0.9712
More...
P22307
Sterol carrier protein 2
DEG_SPOP_SBC_1
422:426
VPTSS
SPOP
0.6008
More...
P31629
Transcription factor HIVEP2
DEG_SPOP_SBC_1
546:550
VPTSS
SPOP
0.9975
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2863:2867
VPTSS
SPOP
0.9646
More...
Q01973
Inactive tyrosine-protein kinase transmembrane receptor ROR1
DEG_SPOP_SBC_1
41:45
VPTSS
SPOP
0.8246
More...
Q02447
Transcription factor Sp3
DEG_SPOP_SBC_1
331:335
VPTSS
SPOP
0.9924
More...
Q8WWM7
Ataxin-2-like protein
DEG_SPOP_SBC_1
471:475
VPTSS
SPOP
0.9372
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12511:12515
VPTSS
SPOP
0.96
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12667:12671
VPTSS
SPOP
0.9914
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1602:1606
VPTSS
SPOP
0.9498
More...
P60413
Keratin-associated protein 10-12
DEG_SPOP_SBC_1
216:220
VPTSS
SPOP
0.7395
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
927:931
VPTSS
SPOP
0.8818
More...