DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VSSTT
Uniprot ID:
O14974
Source protein:
Protein phosphatase 1 regulatory subunit 12A
Source gene:
PPP1R12A
Class:
DEG_SPOP_SBC_1
Location:
656:660
E3 ligase:
SPOP
DEGRON score:
0.9967
ASA_SCORE:
76.56
COIL:
0.793
CONS_SCORE:
0.2955
DSS_SCORE:
0.5914
HELIX:
0.1222
FCONS_SCORE:
0.8291
RIG_SCORE:
0.7428
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S657F
TCGA-77-A5G3
LUSC
TCGA
VSSTT
DEG_SPOP_SBC_1
0.6871
p.S657F
TCGA-DK-AA6U
BLCA
TCGA
VSSTT
DEG_SPOP_SBC_1
0.6871
p.S657F
DO219008
BLCA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.6871
p.S657F
DO45456
LUSC
ICGC
VSSTT
DEG_SPOP_SBC_1
0.6871
p.S658Y
TCGA-FS-A1ZP
SKCM
TCGA
VSSTT
DEG_SPOP_SBC_1
0.712
p.S658Y
DO37703
SKCM
ICGC
VSSTT
DEG_SPOP_SBC_1
0.712
p.T659K
DO229019
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.7306
p.T661N
DO229028
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.3056
p.T661N
DO229037
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.3056
p.T650K
DO229036
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.1667
p.Q649K
DO229041
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.1389
p.R664T
D-423MG
central_nervous_system
COSMIC
VSSTT
DEG_SPOP_SBC_1
0.2222
p.R659L
NCI-H2347
lung
COSMIC
VSSTT
DEG_SPOP_SBC_1
0.8428
Drug responses associated with PPP1R12A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
656:660
VSSTT
SPOP
0.9967
More...
Q15398
Disks large-associated protein 5
DEG_SPOP_SBC_1
220:224
VSSTT
SPOP
0.781
More...
Q3SXY7
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
DEG_SPOP_SBC_1
420:424
VSSTT
SPOP
0.9437
More...
Q8NHH9
Atlastin-2
DEG_SPOP_SBC_1
33:37
VSSTT
SPOP
0.999
More...
Q8TBY9
Cilia- and flagella-associated protein 251
DEG_SPOP_SBC_1
229:233
VSSTT
SPOP
0.9658
More...
Q8TC05
Nuclear protein MDM1
DEG_SPOP_SBC_1
373:377
VSSTT
SPOP
0.9916
More...
Q8TF66
Leucine-rich repeat-containing protein 15
DEG_SPOP_SBC_1
502:506
VSSTT
SPOP
0.584
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
1165:1169
VSSTT
SPOP
0.9972
More...
Q96K83
Zinc finger protein 521
DEG_SPOP_SBC_1
354:358
VSSTT
SPOP
0.9025
More...
Q9H7N4
Splicing factor, arginine/serine-rich 19
DEG_SPOP_SBC_1
845:849
VSSTT
SPOP
0.9657
More...
A6NMB9
Fidgetin-like protein 2
DEG_SPOP_SBC_1
21:25
VSSTT
SPOP
0.9977
More...