DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSSTT
Uniprot ID:
Q8NHH9
Source protein:
Atlastin-2
Source gene:
ATL2
Class:
DEG_SPOP_SBC_1
Location:
33:37
E3 ligase:
SPOP
DEGRON score:
0.999
ASA_SCORE:
79.18
COIL:
0.8692
CONS_SCORE:
0.2904
DSS_SCORE:
0.5915
HELIX:
0.0692
FCONS_SCORE:
1.0021
RIG_SCORE:
0.6603
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S34L
TCGA-4Z-AA84
BLCA
TCGA
VSSTT
DEG_SPOP_SBC_1
0.7667
p.S34L
DO218988
BLCA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.7667
p.S27R
TCGA-51-4079
LUSC
TCGA
VSSTT
DEG_SPOP_SBC_1
0.6111
p.S27R
DO26437
LUSC
ICGC
VSSTT
DEG_SPOP_SBC_1
0.6111
p.P26Q
TCGA-EE-A2GT
SKCM
TCGA
VSSTT
DEG_SPOP_SBC_1
0.1389
p.P26Q
DO37946
SKCM
ICGC
VSSTT
DEG_SPOP_SBC_1
0.1389
p.E35Q
DO761
BLCA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.6744
p.L47V
DO2401
BRCA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.0556
p.P42L
DO228422
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.1944
p.P40Q
DO228976
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.25
p.Q44K
DO229027
LICA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.1389
p.L47F
DO23666
LUAD
ICGC
VSSTT
DEG_SPOP_SBC_1
0.0556
p.K38R
DO228177
PBCA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.75
p.S38P
DO229218
THCA
ICGC
VSSTT
DEG_SPOP_SBC_1
0.75
p.V33I
SIDM00433
T-Lymphoblastic Leukemia
GDSC
VSSTT
DEG_SPOP_SBC_1
0.7076
p.V33I
ACH-000795
Leukemia
CCLE
VSSTT
DEG_SPOP_SBC_1
0.7076
p.V33I
MOLT-13
haematopoietic_and_lymphoid_tissue
COSMIC
VSSTT
DEG_SPOP_SBC_1
0.7076
p.N42D
SIDM00845
Burkitt's Lymphoma
GDSC
VSSTT
DEG_SPOP_SBC_1
0.1944
p.D47G
SIDM00547
Non-Small Cell Lung Carcinoma
GDSC
VSSTT
DEG_SPOP_SBC_1
0.0556
p.D47G
ACH-000438
Lung Cancer
CCLE
VSSTT
DEG_SPOP_SBC_1
0.0556
p.D47G
LU-65
lung
COSMIC
VSSTT
DEG_SPOP_SBC_1
0.0556
p.T37A
SIDM01045
Endometrial Carcinoma
GDSC
VSSTT
DEG_SPOP_SBC_1
0.7139
p.T37A
ACH-000978
Endometrial/Uterine Cancer
CCLE
VSSTT
DEG_SPOP_SBC_1
0.7139
p.T37A
EN
endometrium
COSMIC
VSSTT
DEG_SPOP_SBC_1
0.7139
p.D29G
LU-65
lung
COSMIC
VSSTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with ATL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
656:660
VSSTT
SPOP
0.9967
More...
Q15398
Disks large-associated protein 5
DEG_SPOP_SBC_1
220:224
VSSTT
SPOP
0.781
More...
Q3SXY7
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
DEG_SPOP_SBC_1
420:424
VSSTT
SPOP
0.9437
More...
Q8NHH9
Atlastin-2
DEG_SPOP_SBC_1
33:37
VSSTT
SPOP
0.999
More...
Q8TBY9
Cilia- and flagella-associated protein 251
DEG_SPOP_SBC_1
229:233
VSSTT
SPOP
0.9658
More...
Q8TC05
Nuclear protein MDM1
DEG_SPOP_SBC_1
373:377
VSSTT
SPOP
0.9916
More...
Q8TF66
Leucine-rich repeat-containing protein 15
DEG_SPOP_SBC_1
502:506
VSSTT
SPOP
0.584
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
1165:1169
VSSTT
SPOP
0.9972
More...
Q96K83
Zinc finger protein 521
DEG_SPOP_SBC_1
354:358
VSSTT
SPOP
0.9025
More...
Q9H7N4
Splicing factor, arginine/serine-rich 19
DEG_SPOP_SBC_1
845:849
VSSTT
SPOP
0.9657
More...
A6NMB9
Fidgetin-like protein 2
DEG_SPOP_SBC_1
21:25
VSSTT
SPOP
0.9977
More...