DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VVSTS
Uniprot ID:
Q13422
Source protein:
DNA-binding protein Ikaros
Source gene:
IKZF1
Class:
DEG_SPOP_SBC_1
Location:
451:455
E3 ligase:
SPOP
DEGRON score:
0.7186
ASA_SCORE:
65.92
COIL:
0.607
CONS_SCORE:
0.5293
DSS_SCORE:
0.2709
HELIX:
0.0098
FCONS_SCORE:
0.9628
RIG_SCORE:
0.7576
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q458H
TCGA-44-7662
LUAD
TCGA
VVSTS
DEG_SPOP_SBC_1
0.25
p.Q458H
DO23597
LUAD
ICGC
VVSTS
DEG_SPOP_SBC_1
0.25
p.Q458H
ACH-001719
Ovarian Cancer
CCLE
VVSTS
DEG_SPOP_SBC_1
0.25
p.D459Y
TCGA-44-7662
LUAD
TCGA
VVSTS
DEG_SPOP_SBC_1
0.2222
p.D459Y
DO23597
LUAD
ICGC
VVSTS
DEG_SPOP_SBC_1
0.2222
p.E462Q
TCGA-70-6722
LUSC
TCGA
VVSTS
DEG_SPOP_SBC_1
0.1389
p.E462Q
DO27755
LUSC
ICGC
VVSTS
DEG_SPOP_SBC_1
0.1389
p.R445L
TCGA-86-8073
LUAD
TCGA
VVSTS
DEG_SPOP_SBC_1
0.6111
p.R445L
DO229015
LICA
ICGC
VVSTS
DEG_SPOP_SBC_1
0.6111
p.R445L
DO23624
LUAD
ICGC
VVSTS
DEG_SPOP_SBC_1
0.6111
p.S457N
TCGA-AA-3492
COAD
TCGA
VVSTS
DEG_SPOP_SBC_1
0.2778
p.S457N
DO8224
COAD
ICGC
VVSTS
DEG_SPOP_SBC_1
0.2778
p.G443D
TCGA-AA-3672
COAD
TCGA
VVSTS
DEG_SPOP_SBC_1
0.1111
p.G443D
TCGA-AX-A1CE
UCEC
TCGA
VVSTS
DEG_SPOP_SBC_1
0.1111
p.G443D
DO9010
COAD
ICGC
VVSTS
DEG_SPOP_SBC_1
0.1111
p.G443D
DO42280
UCEC
ICGC
VVSTS
DEG_SPOP_SBC_1
0.1111
p.S457R
TCGA-D3-A5GR
SKCM
TCGA
VVSTS
DEG_SPOP_SBC_1
0.2778
p.S457R
DO47436
SKCM
ICGC
VVSTS
DEG_SPOP_SBC_1
0.2778
p.G443S
TCGA-F4-6703
COAD
TCGA
VVSTS
DEG_SPOP_SBC_1
0.1111
p.G443S
DO9908
COAD
ICGC
VVSTS
DEG_SPOP_SBC_1
0.1111
p.S464L
TCGA-FI-A2D5
UCEC
TCGA
VVSTS
DEG_SPOP_SBC_1
0.0833
p.S464L
DO222439
BTCA
ICGC
VVSTS
DEG_SPOP_SBC_1
0.0833
p.S464L
DO41331
UCEC
ICGC
VVSTS
DEG_SPOP_SBC_1
0.0833
p.Q458K
TCGA-FS-A1ZR
SKCM
TCGA
VVSTS
DEG_SPOP_SBC_1
0.25
p.Q458K
DO37651
SKCM
ICGC
VVSTS
DEG_SPOP_SBC_1
0.25
p.E449Q
TCGA-GU-A42P
BLCA
TCGA
VVSTS
DEG_SPOP_SBC_1
0.2778
p.E449Q
DO534
BLCA
ICGC
VVSTS
DEG_SPOP_SBC_1
0.2778
p.G443V
TCGA-IB-7651
PAAD
TCGA
VVSTS
DEG_SPOP_SBC_1
0.1111
p.G443V
DO46657
PAAD
ICGC
VVSTS
DEG_SPOP_SBC_1
0.1111
p.R445H
TCGA-RS-A6TO
HNSC
TCGA
VVSTS
DEG_SPOP_SBC_1
0.6111
p.R445H
DO219060
HNSC
ICGC
VVSTS
DEG_SPOP_SBC_1
0.6111
p.R460W
DO221161
AML
ICGC
VVSTS
DEG_SPOP_SBC_1
0.6389
p.F463L
DO222762
COCA
ICGC
VVSTS
DEG_SPOP_SBC_1
0.2222
p.R460L
DO229032
LICA
ICGC
VVSTS
DEG_SPOP_SBC_1
0.6389
p.D446Y
DO229009
LICA
ICGC
VVSTS
DEG_SPOP_SBC_1
0.1944
p.E465K
SIDM00524
Small Cell Lung Carcinoma
GDSC
VVSTS
DEG_SPOP_SBC_1
0.0556
p.E465K
ACH-000703
Lung Cancer
CCLE
VVSTS
DEG_SPOP_SBC_1
0.0556
p.E465K
DMS-79
lung
COSMIC
VVSTS
DEG_SPOP_SBC_1
0.0556
p.S445P
SIDM01176
B-Lymphoblastic Leukemia
GDSC
VVSTS
DEG_SPOP_SBC_1
0.6111
p.E443D
SIDM00077
Oral Cavity Carcinoma
GDSC
VVSTS
DEG_SPOP_SBC_1
0.1111
p.E443D
ACH-001331
Head and Neck Cancer
CCLE
VVSTS
DEG_SPOP_SBC_1
0.1111
p.E443D
BICR10
upper_aerodigestive_tract
COSMIC
VVSTS
DEG_SPOP_SBC_1
0.1111
p.A448V
ACH-001719
Ovarian Cancer
CCLE
VVSTS
DEG_SPOP_SBC_1
0.25
p.S457T
CAPAN-1
pancreas
COSMIC
VVSTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with IKZF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
231:235
VVSTS
SPOP
0.8956
More...
O95235
Kinesin-like protein KIF20A
DEG_SPOP_SBC_1
45:49
VVSTS
SPOP
0.9985
More...
O95600
Krueppel-like factor 8
DEG_SPOP_SBC_1
121:125
VVSTS
SPOP
0.8645
More...
P23469
Receptor-type tyrosine-protein phosphatase epsilon
DEG_SPOP_SBC_1
78:82
VVSTS
SPOP
0.6754
More...
P51795
H
DEG_SPOP_SBC_1
724:728
VVSTS
SPOP
0.9829
More...
Q13422
DNA-binding protein Ikaros
DEG_SPOP_SBC_1
451:455
VVSTS
SPOP
0.7186
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
1171:1175
VVSTS
SPOP
0.7463
More...
Q9H7D0
Dedicator of cytokinesis protein 5
DEG_SPOP_SBC_1
1679:1683
VVSTS
SPOP
0.9974
More...
O15016
Tripartite motif-containing protein 66
DEG_SPOP_SBC_1
816:820
VVSTS
SPOP
0.6338
More...
Q96BU1
S100P-binding protein
DEG_SPOP_SBC_1
270:274
VVSTS
SPOP
0.9689
More...