Search results: The pahtway p4083 has 74 genes in the original annotation. Currently, there are 46 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
56832IFNKIFNT1 | INFE1interferon, kappa-CV:PGCnp
390110ACCSL-1-aminocyclopropane-1-carboxylate synthase (inactive)-like11p11.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
55553SOX6HSSOX6 | SOXDSRY-box 611p15.3CV:PGCnp
PMID:cooccur
22941SHANK2AUTS17 | CORTBP1 | CTTNBP1 | ProSAP1 | SHANK | SPANK-3SH3 and multiple ankyrin repeat domains 211q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
390259BSXBSX1brain specific homeobox11q24.1CV:PGCnp
GSMA_I
23316CUX2CDP2 | CUTL2cut like homeobox 212q24.12CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
26278SACSARSACS | DNAJC29 | PPP1R138 | SPAX6sacsin molecular chaperone13q12CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
122258SPACA7C13orf28sperm acrosome associated 713q34CV:PGCnp
4901NRLD14S46E | NRL-MAF | RP27neural retina leucine zipper14q11.1-q11.2GSMA_I
PMID:cooccur
54207KCNK10K2p10.1 | PPP1R97 | TREK-2 | TREK2potassium two pore domain channel subfamily K member 1014q31.3CV:GWASdb
CV:PGCnp
PMID:cooccur
51676ASB2ASB-2ankyrin repeat and SOCS box containing 214q32.12CV:PGCnp
56924PAK6PAK5p21 protein (Cdc42/Rac)-activated kinase 615q14CV:GWAScat
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
1143CHRNB4-cholinergic receptor nicotinic beta 4 subunit15q24CV:PGCnp
GO_Annotation
PMID:cooccur
57611ISLR2LINXimmunoglobulin superfamily containing leucine-rich repeat 215q24.1CV:PGCnp
DMG:Jaffe_2016
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
93107KCNG4KV6.3 | KV6.4potassium voltage-gated channel modifier subfamily G member 416q24.1CV:GWASdb
CV:PGCnp
Expression
23746AIPL1AIPL2 | LCA4aryl hydrocarbon receptor interacting protein-like 117p13.1CV:PGCnp
DMG:Wockner_2014
4025LPOSPOlactoperoxidase17q23.1CV:PGCnp
DMG:Montano_2016
PMID:cooccur
6329SCN4ACMS16 | HOKPP2 | HYKPP | HYPP | NAC1A | Na(V)1.4 | Nav1.4 | SkM1sodium voltage-gated channel alpha subunit 417q23.3CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
924CD7GP40 | LEU-9 | TP41 | Tp40CD7 molecule17q25.2-q25.3DMG:vanEijk_2014
PMID:cooccur
1463NCANCSPG3neurocan19p12CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
LK:YES
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
2523FUT1H | HH | HSCfucosyltransferase 1 (H blood group)19q13.3CV:PGCnp
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5972RENHNFJ2renin1q32CV:PGCnp
GO_Annotation
PMID:cooccur
10637LEFTY1LEFTB | LEFTYBleft-right determination factor 11q42.1CV:PGCnp
DMG:Jaffe_2016
5173PDYNADCA | PENKB | SCA23prodynorphin20p13Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
434ASIPAGSW | AGTI | AGTIL | ASP | SHEP9agouti signaling protein20q11.2-q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2686GGT7D20S101 | GGT4 | GGTL3 | GGTL5 | dJ18C9.2gamma-glutamyltransferase 720q11.22CV:PGCnp
DMG:Wockner_2014
958CD40Bp50 | CDW40 | TNFRSF5 | p50CD40 molecule20q12-q13.2CV:GWASdb
CV:PGCnp
PMID:cooccur
81031SLC2A10ATS | GLUT10solute carrier family 2 member 1020q13.1CV:GWASdb
CV:PGCnp
5816PVALBD22S749parvalbumin22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
54456MOV10L1CHAMP | DJ402G11.8Mov10 RISC complex RNA helicase like 122q13.33Association
CV:GWASdb
CV:PGCnp
79924ADM2AM2 | dJ579N16.4adrenomedullin 222q13.33CV:PGCnp
1146CHRNGACHRGcholinergic receptor nicotinic gamma subunit2q37.1DNM:Guipponi_2014
GO_Annotation
PMID:cooccur
7881KCNAB1AKR6A3 | KCNA1B | KV-BETA-1 | Kvb1.3 | hKvBeta3 | hKvb3potassium voltage-gated channel subfamily A member regulatory beta subunit 13q26.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
EXCITABILITY
170591S100ZGm625 | S100-zetaS100 calcium binding protein Z5q13.3CV:GWASdb
CV:PGCnp
51294PCDH12VE-cadherin-2 | VECAD2protocadherin 125q31Expression
GO_Annotation
GSMA_I
PMID:cooccur
7021TFAP2BAP-2B | AP2-Btranscription factor AP-2 beta (activating enhancer binding protein 2 beta)6p12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
10279PRSS16TSSPprotease, serine 166p21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
1302COL11A2DFNA13 | DFNB53 | FBCG2 | HKE5 | PARP | STL3collagen type XI alpha 26p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
7124TNFDIF | TNF-alpha | TNFA | TNFSF2 | TNLG1Ftumor necrosis factor6p21.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
10875FGL2T49 | pT49fibrinogen like 27q11.23GO_Annotation
5368PNOCN/OFQ | NOP | OFQ | PPNOC | ppN/OFQprepronociceptin8p21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
137814NKX2-6CSX2 | CTHM | NKX2F | NKX4-2NK2 homeobox 68p21.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
4956ODF1CT133 | HSPB10 | ODF | ODF2 | ODF27 | ODFP | ODFPG | ODFPGA | ODFPGB | RT7 | SODFouter dense fiber of sperm tails 18q22.3CV:GWASdb
CV:PGCnp
5079PAX5ALL3 | BSAPpaired box 59p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet