DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ANSSS
Uniprot ID:
Q9BRS8
Source protein:
La-related protein 6
Source gene:
LARP6
Class:
DEG_SPOP_SBC_1
Location:
336:340
E3 ligase:
SPOP
DEGRON score:
0.9686
ASA_SCORE:
81.14
COIL:
0.905
CONS_SCORE:
0.4821
DSS_SCORE:
0.7656
HELIX:
0.0774
FCONS_SCORE:
1.0009
RIG_SCORE:
0.5048
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q328H
TCGA-A5-A1OF
UCEC
TCGA
ANSSS
DEG_SPOP_SBC_1
0.1111
p.Q328H
DO42568
UCEC
ICGC
ANSSS
DEG_SPOP_SBC_1
0.1111
p.P342L
TCGA-DD-AADN
LIHC
TCGA
ANSSS
DEG_SPOP_SBC_1
0.2778
p.P342L
DO52239
LIHC
ICGC
ANSSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with LARP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ANSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22670
MHC class II regulatory factor RFX1
DEG_SPOP_SBC_1
213:217
ANSSS
SPOP
0.9966
More...
P42694
Probable helicase with zinc finger domain
DEG_SPOP_SBC_1
1879:1883
ANSSS
SPOP
0.986
More...
P80192
Mitogen-activated protein kinase kinase kinase 9
DEG_SPOP_SBC_1
1021:1025
ANSSS
SPOP
0.9968
More...
Q06945
Transcription factor SOX-4
DEG_SPOP_SBC_1
139:143
ANSSS
SPOP
0.9719
More...
Q6UWB1
Interleukin-27 receptor subunit alpha
DEG_SPOP_SBC_1
562:566
ANSSS
SPOP
0.7903
More...
Q6ZNA4
E3 ubiquitin-protein ligase Arkadia
DEG_SPOP_SBC_1
551:555
ANSSS
SPOP
0.983
More...
Q8IZW8
Tensin-4
DEG_SPOP_SBC_1
311:315
ANSSS
SPOP
0.8185
More...
Q99743
Neuronal PAS domain-containing protein 2
DEG_SPOP_SBC_1
720:724
ANSSS
SPOP
0.9105
More...
Q9BRS8
La-related protein 6
DEG_SPOP_SBC_1
336:340
ANSSS
SPOP
0.9686
More...
Q9HCD5
Nuclear receptor coactivator 5
DEG_SPOP_SBC_1
446:450
ANSSS
SPOP
0.8794
More...
Q9UKY1
Zinc fingers and homeoboxes protein 1
DEG_SPOP_SBC_1
729:733
ANSSS
SPOP
0.8431
More...
Q9Y2F9
BTB/POZ domain-containing protein 3
DEG_SPOP_SBC_1
73:77
ANSSS
SPOP
0.9841
More...
Q9Y4F3
Meiosis regulator and mRNA stability factor 1
DEG_SPOP_SBC_1
775:779
ANSSS
SPOP
0.9091
More...
Q9H1C0
Lysophosphatidic acid receptor 5
DEG_SPOP_SBC_1
3:7
ANSSS
SPOP
0.6526
More...
Q9P2F8
Signal-induced proliferation-associated 1-like protein 2
DEG_SPOP_SBC_1
429:433
ANSSS
SPOP
0.756
More...