DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ATSTT
Uniprot ID:
Q5T2D2
Source protein:
Trem-like transcript 2 protein
Source gene:
TREML2
Class:
DEG_SPOP_SBC_1
Location:
194:198
E3 ligase:
SPOP
DEGRON score:
0.8687
ASA_SCORE:
82.62
COIL:
0.9016
CONS_SCORE:
0.5462
DSS_SCORE:
0.6127
HELIX:
0.0224
FCONS_SCORE:
1.0267
RIG_SCORE:
0.6878
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G189V
TCGA-12-0775
GBM
TCGA
ATSTT
DEG_SPOP_SBC_1
0.1944
p.G189V
DO14133
GBM
ICGC
ATSTT
DEG_SPOP_SBC_1
0.1944
p.S196R
TCGA-49-AAR0
LUAD
TCGA
ATSTT
DEG_SPOP_SBC_1
0.7427
p.S196R
DO218917
LUAD
ICGC
ATSTT
DEG_SPOP_SBC_1
0.7427
p.P202H
TCGA-BA-A6DA
HNSC
TCGA
ATSTT
DEG_SPOP_SBC_1
0.2222
p.P202H
DO44448
HNSC
ICGC
ATSTT
DEG_SPOP_SBC_1
0.2222
p.S199R
TCGA-BA-A6DA
HNSC
TCGA
ATSTT
DEG_SPOP_SBC_1
0.3056
p.S199R
DO44448
HNSC
ICGC
ATSTT
DEG_SPOP_SBC_1
0.3056
p.R204K
TCGA-GN-A262
SKCM
TCGA
ATSTT
DEG_SPOP_SBC_1
0.1667
p.R204K
DO231782
LINC
ICGC
ATSTT
DEG_SPOP_SBC_1
0.1667
p.R204K
DO37515
SKCM
ICGC
ATSTT
DEG_SPOP_SBC_1
0.1667
p.A194D
DO228976
LICA
ICGC
ATSTT
DEG_SPOP_SBC_1
0.7793
p.T198N
DO229028
LICA
ICGC
ATSTT
DEG_SPOP_SBC_1
0.7055
p.T193A
SIDM01169
Ovarian Carcinoma
GDSC
ATSTT
DEG_SPOP_SBC_1
0.3056
p.T193A
SIDM01716
Non-Cancerous
GDSC
ATSTT
DEG_SPOP_SBC_1
0.3056
p.T193A
SIDM00175
Melanoma
GDSC
ATSTT
DEG_SPOP_SBC_1
0.3056
p.T193A
SIDM01772
Mesothelioma
GDSC
ATSTT
DEG_SPOP_SBC_1
0.3056
p.T193A
SIDM01424
B-Lymphoblastic Leukemia
GDSC
ATSTT
DEG_SPOP_SBC_1
0.3056
p.M206T
SIDM01608
Endometrial Carcinoma
GDSC
ATSTT
DEG_SPOP_SBC_1
0.1111
p.M206T
ACH-000990
Endometrial/Uterine Cancer
CCLE
ATSTT
DEG_SPOP_SBC_1
0.1111
p.S186C
ACH-001611
Brain Cancer
CCLE
ATSTT
DEG_SPOP_SBC_1
0.1111
Drug responses associated with TREML2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14964
Hepatocyte growth factor-regulated tyrosine kinase substrate
DEG_SPOP_SBC_1
227:231
ATSTT
SPOP
0.8403
More...
P26651
mRNA decay activator protein ZFP36
DEG_SPOP_SBC_1
96:100
ATSTT
SPOP
0.8743
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
1173:1177
ATSTT
SPOP
0.9978
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
2055:2059
ATSTT
SPOP
0.9969
More...
Q5T2D2
Trem-like transcript 2 protein
DEG_SPOP_SBC_1
194:198
ATSTT
SPOP
0.8687
More...
Q7Z6Z7
E3 ubiquitin-protein ligase HUWE1
DEG_SPOP_SBC_1
3486:3490
ATSTT
SPOP
0.9297
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
3718:3722
ATSTT
SPOP
0.6471
More...
Q96KS0
Prolyl hydroxylase EGLN2
DEG_SPOP_SBC_1
68:72
ATSTT
SPOP
0.9971
More...
Q9H7T9
Aurora kinase A and ninein-interacting protein
DEG_SPOP_SBC_1
120:124
ATSTT
SPOP
0.9953
More...
Q9UHR5
SAP30-binding protein
DEG_SPOP_SBC_1
235:239
ATSTT
SPOP
0.6492
More...
Q12872
Splicing factor, suppressor of white-apricot homolog
DEG_SPOP_SBC_1
433:437
ATSTT
SPOP
0.9872
More...