DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTSS
Uniprot ID:
Q8N5C6
Source protein:
S1 RNA-binding domain-containing protein 1
Source gene:
SRBD1
Class:
DEG_SPOP_SBC_1
Location:
791:795
E3 ligase:
SPOP
DEGRON score:
0.801
ASA_SCORE:
65.62
COIL:
0.6836
CONS_SCORE:
0.2085
DSS_SCORE:
0.3802
HELIX:
0.132
FCONS_SCORE:
0.9665
RIG_SCORE:
0.7661
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I787V
TCGA-AP-A1DK
UCEC
TCGA
AVTSS
DEG_SPOP_SBC_1
0.2222
p.E803K
TCGA-AX-A2HC
UCEC
TCGA
AVTSS
DEG_SPOP_SBC_1
0.1111
p.N802K
SIDM01608
Endometrial Carcinoma
GDSC
AVTSS
DEG_SPOP_SBC_1
0.1389
p.N802K
ACH-000990
Endometrial/Uterine Cancer
CCLE
AVTSS
DEG_SPOP_SBC_1
0.1389
p.N802Y
ACH-002357
Non-Cancerous
CCLE
AVTSS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with SRBD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15822
Zinc finger protein 40
DEG_SPOP_SBC_1
329:333
AVTSS
SPOP
0.9756
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
98:102
AVTSS
SPOP
0.9759
More...
Q15811
Intersectin-1
DEG_SPOP_SBC_1
837:841
AVTSS
SPOP
0.9768
More...
Q5TCY1
Tau-tubulin kinase 1
DEG_SPOP_SBC_1
917:921
AVTSS
SPOP
0.9878
More...
Q6WCQ1
Myosin phosphatase Rho-interacting protein
DEG_SPOP_SBC_1
176:180
AVTSS
SPOP
0.9872
More...
Q6ZNA4
E3 ubiquitin-protein ligase Arkadia
DEG_SPOP_SBC_1
428:432
AVTSS
SPOP
0.9917
More...
Q9HCM4
Band 4.1-like protein 5
DEG_SPOP_SBC_1
709:713
AVTSS
SPOP
0.6181
More...
Q9UGI9
5'-AMP-activated protein kinase subunit gamma-3
DEG_SPOP_SBC_1
41:45
AVTSS
SPOP
0.9578
More...
Q5T9C9
Phosphatidylinositol 4-phosphate 5-kinase-like protein 1
DEG_SPOP_SBC_1
22:26
AVTSS
SPOP
0.6064
More...
Q8N5C6
S1 RNA-binding domain-containing protein 1
DEG_SPOP_SBC_1
791:795
AVTSS
SPOP
0.801
More...