DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTSS
Uniprot ID:
Q9UGI9
Source protein:
5'-AMP-activated protein kinase subunit gamma-3
Source gene:
PRKAG3
Class:
DEG_SPOP_SBC_1
Location:
41:45
E3 ligase:
SPOP
DEGRON score:
0.9578
ASA_SCORE:
77.6
COIL:
0.895
CONS_SCORE:
0.2348
DSS_SCORE:
0.5851
HELIX:
0.0788
FCONS_SCORE:
1.0264
RIG_SCORE:
0.6609
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R48I
TCGA-AA-A00N
COAD
TCGA
AVTSS
DEG_SPOP_SBC_1
0.25
p.R48I
DO9876
COAD
ICGC
AVTSS
DEG_SPOP_SBC_1
0.25
p.I49L
TCGA-AP-A0LM
UCEC
TCGA
AVTSS
DEG_SPOP_SBC_1
0.2222
p.I49L
DO43306
UCEC
ICGC
AVTSS
DEG_SPOP_SBC_1
0.2222
p.A55V
TCGA-DF-A2KU
UCEC
TCGA
AVTSS
DEG_SPOP_SBC_1
0.0556
p.A55V
DO223286
UCEC
ICGC
AVTSS
DEG_SPOP_SBC_1
0.0556
p.R48K
TCGA-EE-A2GD
SKCM
TCGA
AVTSS
DEG_SPOP_SBC_1
0.25
p.R48K
DO37603
SKCM
ICGC
AVTSS
DEG_SPOP_SBC_1
0.25
p.F53V
DO8264
COAD
ICGC
AVTSS
DEG_SPOP_SBC_1
0.1111
p.L35M
DO50458
KIRC
ICGC
AVTSS
DEG_SPOP_SBC_1
0.1667
p.W46R
DO23192
LINC
ICGC
AVTSS
DEG_SPOP_SBC_1
0.3056
p.R50H
SIDM01016
T-Lymphoblastic Leukemia
GDSC
AVTSS
DEG_SPOP_SBC_1
0.1944
p.R50H
SIDM01263
T-Lymphoblastic Leukemia
GDSC
AVTSS
DEG_SPOP_SBC_1
0.1944
p.R50H
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
AVTSS
DEG_SPOP_SBC_1
0.1944
p.S36L
SIDM00562
Breast Carcinoma
GDSC
AVTSS
DEG_SPOP_SBC_1
0.1944
p.S36L
ACH-002163
Breast Cancer
CCLE
AVTSS
DEG_SPOP_SBC_1
0.1944
p.G51R
SIDM00756
Non-Small Cell Lung Carcinoma
GDSC
AVTSS
DEG_SPOP_SBC_1
0.1667
p.G51R
ACH-000886
Lung Cancer
CCLE
AVTSS
DEG_SPOP_SBC_1
0.1667
p.G51R
NCI-H2009
lung
COSMIC
AVTSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PRKAG3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15822
Zinc finger protein 40
DEG_SPOP_SBC_1
329:333
AVTSS
SPOP
0.9756
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
98:102
AVTSS
SPOP
0.9759
More...
Q15811
Intersectin-1
DEG_SPOP_SBC_1
837:841
AVTSS
SPOP
0.9768
More...
Q5TCY1
Tau-tubulin kinase 1
DEG_SPOP_SBC_1
917:921
AVTSS
SPOP
0.9878
More...
Q6WCQ1
Myosin phosphatase Rho-interacting protein
DEG_SPOP_SBC_1
176:180
AVTSS
SPOP
0.9872
More...
Q6ZNA4
E3 ubiquitin-protein ligase Arkadia
DEG_SPOP_SBC_1
428:432
AVTSS
SPOP
0.9917
More...
Q9HCM4
Band 4.1-like protein 5
DEG_SPOP_SBC_1
709:713
AVTSS
SPOP
0.6181
More...
Q9UGI9
5'-AMP-activated protein kinase subunit gamma-3
DEG_SPOP_SBC_1
41:45
AVTSS
SPOP
0.9578
More...
Q5T9C9
Phosphatidylinositol 4-phosphate 5-kinase-like protein 1
DEG_SPOP_SBC_1
22:26
AVTSS
SPOP
0.6064
More...
Q8N5C6
S1 RNA-binding domain-containing protein 1
DEG_SPOP_SBC_1
791:795
AVTSS
SPOP
0.801
More...