DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTSS
Uniprot ID:
Q9HCM4
Source protein:
Band 4.1-like protein 5
Source gene:
EPB41L5
Class:
DEG_SPOP_SBC_1
Location:
709:713
E3 ligase:
SPOP
DEGRON score:
0.6181
ASA_SCORE:
73.12
COIL:
0.8314
CONS_SCORE:
0.5339
DSS_SCORE:
0.2402
HELIX:
0.0362
FCONS_SCORE:
1.0375
RIG_SCORE:
0.7587
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P702Q
TCGA-D3-A2JP
SKCM
TCGA
AVTSS
DEG_SPOP_SBC_1
0.1389
p.P702Q
DO47407
SKCM
ICGC
AVTSS
DEG_SPOP_SBC_1
0.1389
p.F705L
TCGA-DK-A6AW
BLCA
TCGA
AVTSS
DEG_SPOP_SBC_1
0.2222
p.F705L
TCGA-EO-A22U
UCEC
TCGA
AVTSS
DEG_SPOP_SBC_1
0.2222
p.F705L
DO48566
BLCA
ICGC
AVTSS
DEG_SPOP_SBC_1
0.2222
p.F705L
DO43755
UCEC
ICGC
AVTSS
DEG_SPOP_SBC_1
0.2222
p.A703G
DO230524
LUSC
ICGC
AVTSS
DEG_SPOP_SBC_1
0.1667
p.S712G
SIDM01259
B-Lymphoblastic Leukemia
GDSC
AVTSS
DEG_SPOP_SBC_1
0.6993
p.S712G
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
AVTSS
DEG_SPOP_SBC_1
0.6993
p.P702S
SIDM00667
Other Sarcomas
GDSC
AVTSS
DEG_SPOP_SBC_1
0.1389
p.P702S
ACH-002246
Sarcoma
CCLE
AVTSS
DEG_SPOP_SBC_1
0.1389
p.P702S
Hs633T
soft_tissue
COSMIC
AVTSS
DEG_SPOP_SBC_1
0.1389
p.S711G
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
AVTSS
DEG_SPOP_SBC_1
0.6993
p.P701S
Hs633T
soft_tissue
COSMIC
AVTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with EPB41L5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15822
Zinc finger protein 40
DEG_SPOP_SBC_1
329:333
AVTSS
SPOP
0.9756
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
98:102
AVTSS
SPOP
0.9759
More...
Q15811
Intersectin-1
DEG_SPOP_SBC_1
837:841
AVTSS
SPOP
0.9768
More...
Q5TCY1
Tau-tubulin kinase 1
DEG_SPOP_SBC_1
917:921
AVTSS
SPOP
0.9878
More...
Q6WCQ1
Myosin phosphatase Rho-interacting protein
DEG_SPOP_SBC_1
176:180
AVTSS
SPOP
0.9872
More...
Q6ZNA4
E3 ubiquitin-protein ligase Arkadia
DEG_SPOP_SBC_1
428:432
AVTSS
SPOP
0.9917
More...
Q9HCM4
Band 4.1-like protein 5
DEG_SPOP_SBC_1
709:713
AVTSS
SPOP
0.6181
More...
Q9UGI9
5'-AMP-activated protein kinase subunit gamma-3
DEG_SPOP_SBC_1
41:45
AVTSS
SPOP
0.9578
More...
Q5T9C9
Phosphatidylinositol 4-phosphate 5-kinase-like protein 1
DEG_SPOP_SBC_1
22:26
AVTSS
SPOP
0.6064
More...
Q8N5C6
S1 RNA-binding domain-containing protein 1
DEG_SPOP_SBC_1
791:795
AVTSS
SPOP
0.801
More...