DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KKENS
Uniprot ID:
O00515
Source protein:
Ladinin-1
Source gene:
LAD1
Class:
DEG_APCC_KENBOX_2
Location:
381:385
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9602
ASA_SCORE:
116.74
COIL:
0.9068
CONS_SCORE:
0.4776
DSS_SCORE:
0.6355
HELIX:
0.0832
FCONS_SCORE:
0.8169
RIG_SCORE:
0.6407
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R377W
TCGA-55-7227
LUAD
TCGA
KKENS
DEG_APCC_KENBOX_2
0.2222
p.R391S
TCGA-A3-A6NL
KIRC
TCGA
KKENS
DEG_APCC_KENBOX_2
0.1667
p.M378I
TCGA-EE-A2GU
SKCM
TCGA
KKENS
DEG_APCC_KENBOX_2
0.25
p.S385L
TCGA-EO-A22X
UCEC
TCGA
KKENS
DEG_APCC_KENBOX_2
0.7667
p.R391W
DO24050
LUAD
ICGC
KKENS
DEG_APCC_KENBOX_2
0.1667
p.M392I
DO37639
SKCM
ICGC
KKENS
DEG_APCC_KENBOX_2
0.5833
p.R374Q
DO37603
SKCM
ICGC
KKENS
DEG_APCC_KENBOX_2
0.1389
p.R374Q
DO37567
SKCM
ICGC
KKENS
DEG_APCC_KENBOX_2
0.1389
p.R374Q
DO37814
SKCM
ICGC
KKENS
DEG_APCC_KENBOX_2
0.1389
p.R382H
DO41584
UCEC
ICGC
KKENS
DEG_APCC_KENBOX_2
0.8244
p.S385P
SIDM00596
Endometrial Carcinoma
GDSC
KKENS
DEG_APCC_KENBOX_2
0.6752
p.S385P
ACH-001517
Endometrial/Uterine Cancer
CCLE
KKENS
DEG_APCC_KENBOX_2
0.6752
p.S385P
HEC-1
endometrium
COSMIC
KKENS
DEG_APCC_KENBOX_2
0.6752
p.M395R
Mewo
skin
COSMIC
KKENS
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with LAD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15151
Protein Mdm4
DEG_APCC_KENBOX_2
379:383
KKENS
APC,CDC20,FZR1
0.6013
More...
O60242
Adhesion G protein-coupled receptor B3
DEG_APCC_KENBOX_2
1271:1275
KKENS
APC,CDC20,FZR1
0.6429
More...
P29965
CD40 ligand
DEG_APCC_KENBOX_2
106:110
KKENS
APC,CDC20,FZR1
0.7872
More...
P56715
Oxygen-regulated protein 1
DEG_APCC_KENBOX_2
534:538
KKENS
APC,CDC20,FZR1
0.6968
More...
P98082
Disabled homolog 2
DEG_APCC_KENBOX_2
320:324
KKENS
APC,CDC20,FZR1
0.6959
More...
Q7Z2Z1
Treslin
DEG_APCC_KENBOX_2
887:891
KKENS
APC,CDC20,FZR1
0.9836
More...
Q9GZS3
WD repeat-containing protein 61
DEG_APCC_KENBOX_2
28:32
KKENS
APC,CDC20,FZR1
0.5187
More...
Q9NQW8
Cyclic nucleotide-gated cation channel beta-3
DEG_APCC_KENBOX_2
702:706
KKENS
APC,CDC20,FZR1
0.5372
More...
O00515
Ladinin-1
DEG_APCC_KENBOX_2
381:385
KKENS
APC,CDC20,FZR1
0.9602
More...
Q9BY89
Uncharacterized protein KIAA1671
DEG_APCC_KENBOX_2
669:673
KKENS
APC,CDC20,FZR1
0.7067
More...