DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PDSST
Uniprot ID:
O14994
Source protein:
Synapsin-3
Source gene:
SYN3
Class:
DEG_SPOP_SBC_1
Location:
28:32
E3 ligase:
SPOP
DEGRON score:
0.9249
ASA_SCORE:
91.02
COIL:
0.9734
CONS_SCORE:
0.3247
DSS_SCORE:
0.693
HELIX:
0.0158
FCONS_SCORE:
0.8777
RIG_SCORE:
0.5714
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A39T
TCGA-06-5416
GBM
TCGA
PDSST
DEG_SPOP_SBC_1
0.1389
p.A39T
TCGA-EO-A22R
UCEC
TCGA
PDSST
DEG_SPOP_SBC_1
0.1389
p.A39T
DO10880
GBM
ICGC
PDSST
DEG_SPOP_SBC_1
0.1389
p.A39T
DO42713
UCEC
ICGC
PDSST
DEG_SPOP_SBC_1
0.1389
p.Q26E
TCGA-69-7980
LUAD
TCGA
PDSST
DEG_SPOP_SBC_1
0.2778
p.Q26E
DO23678
LUAD
ICGC
PDSST
DEG_SPOP_SBC_1
0.2778
p.M40T
TCGA-85-A5B5
LUSC
TCGA
PDSST
DEG_SPOP_SBC_1
0.1111
p.M40T
DO50102
LUSC
ICGC
PDSST
DEG_SPOP_SBC_1
0.1111
p.R27P
TCGA-DK-AA6U
BLCA
TCGA
PDSST
DEG_SPOP_SBC_1
0.3056
p.R27P
DO219008
BLCA
ICGC
PDSST
DEG_SPOP_SBC_1
0.3056
p.G20D
TCGA-E6-A1LX
UCEC
TCGA
PDSST
DEG_SPOP_SBC_1
0.1111
p.G20D
DO41020
UCEC
ICGC
PDSST
DEG_SPOP_SBC_1
0.1111
p.M22I
TCGA-GV-A3JX
BLCA
TCGA
PDSST
DEG_SPOP_SBC_1
0.1667
p.M22I
DO448
BLCA
ICGC
PDSST
DEG_SPOP_SBC_1
0.1667
p.R27H
TCGA-IB-7651
PAAD
TCGA
PDSST
DEG_SPOP_SBC_1
0.3056
p.R27H
DO46657
PAAD
ICGC
PDSST
DEG_SPOP_SBC_1
0.3056
p.S37F
TCGA-YG-AA3N
SKCM
TCGA
PDSST
DEG_SPOP_SBC_1
0.1944
p.S37F
DO51298
SKCM
ICGC
PDSST
DEG_SPOP_SBC_1
0.1944
p.D24E
DO228948
LICA
ICGC
PDSST
DEG_SPOP_SBC_1
0.2222
p.R27S
DO229027
LICA
ICGC
PDSST
DEG_SPOP_SBC_1
0.3056
p.S37P
DO218842
SKCA
ICGC
PDSST
DEG_SPOP_SBC_1
0.1944
p.S37P
DO218890
SKCA
ICGC
PDSST
DEG_SPOP_SBC_1
0.1944
p.R42G
SIDM00664
Pancreatic Carcinoma
GDSC
PDSST
DEG_SPOP_SBC_1
0.0556
p.S30C
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
PDSST
DEG_SPOP_SBC_1
0.7541
p.S30C
ACH-000945
Lung Cancer
CCLE
PDSST
DEG_SPOP_SBC_1
0.7541
p.S30C
NCI-H650
lung
COSMIC
PDSST
DEG_SPOP_SBC_1
0.7541
p.T23M
SIDM00844
Burkitt's Lymphoma
GDSC
PDSST
DEG_SPOP_SBC_1
0.1944
p.T23M
SIDM01664
Prostate Carcinoma
GDSC
PDSST
DEG_SPOP_SBC_1
0.1944
p.M40R
ACH-002186
Pancreatic Cancer
CCLE
PDSST
DEG_SPOP_SBC_1
0.1111
p.M40R
PL4
pancreas
COSMIC
PDSST
DEG_SPOP_SBC_1
0.1111
p.D31G
EN
endometrium
COSMIC
PDSST
DEG_SPOP_SBC_1
0.7198
p.R37C
SNU-175
large_intestine
COSMIC
PDSST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with SYN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14994
Synapsin-3
DEG_SPOP_SBC_1
28:32
PDSST
SPOP
0.9249
More...
O95425
Supervillin
DEG_SPOP_SBC_1
808:812
PDSST
SPOP
0.9671
More...
P35568
Insulin receptor substrate 1
DEG_SPOP_SBC_1
601:605
PDSST
SPOP
0.6597
More...
Q00872
Myosin-binding protein C, slow-type
DEG_SPOP_SBC_1
579:583
PDSST
SPOP
0.7592
More...
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_SPOP_SBC_1
821:825
PDSST
SPOP
0.9316
More...
Q6NSW7
Homeobox protein NANOGP8
DEG_SPOP_SBC_1
66:70
PDSST
SPOP
0.9702
More...
Q8WTP8
Apoptosis-enhancing nuclease
DEG_SPOP_SBC_1
290:294
PDSST
SPOP
0.9842
More...
Q96L73
Histone-lysine N-methyltransferase, H3 lysine-36 specific
DEG_SPOP_SBC_1
282:286
PDSST
SPOP
0.9334
More...
Q9H9S0
Homeobox protein NANOG
DEG_SPOP_SBC_1
66:70
PDSST
SPOP
0.9889
More...
Q9NYZ3
G2 and S phase-expressed protein 1
DEG_SPOP_SBC_1
462:466
PDSST
SPOP
0.9636
More...
Q1X8D7
Leucine-rich repeat-containing protein 36
DEG_SPOP_SBC_1
386:390
PDSST
SPOP
0.5318
More...