DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PDSST
Uniprot ID:
O95425
Source protein:
Supervillin
Source gene:
SVIL
Class:
DEG_SPOP_SBC_1
Location:
808:812
E3 ligase:
SPOP
DEGRON score:
0.9671
ASA_SCORE:
86.46
COIL:
0.8128
CONS_SCORE:
0.4782
DSS_SCORE:
0.5207
HELIX:
0.1672
FCONS_SCORE:
1.0211
RIG_SCORE:
0.6778
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E798K
TCGA-3C-AALI
BRCA
TCGA
PDSST
DEG_SPOP_SBC_1
0.0556
p.E798K
DO219589
BRCA
ICGC
PDSST
DEG_SPOP_SBC_1
0.0556
p.P808H
TCGA-A5-A0G2
UCEC
TCGA
PDSST
DEG_SPOP_SBC_1
0.7694
p.P808H
DO41235
UCEC
ICGC
PDSST
DEG_SPOP_SBC_1
0.7694
p.E817K
TCGA-AX-A05Z
UCEC
TCGA
PDSST
DEG_SPOP_SBC_1
0.1944
p.E817K
DO40884
UCEC
ICGC
PDSST
DEG_SPOP_SBC_1
0.1944
p.S810F
TCGA-XF-AAML
BLCA
TCGA
PDSST
DEG_SPOP_SBC_1
0.7982
p.S810F
DO51933
BLCA
ICGC
PDSST
DEG_SPOP_SBC_1
0.7982
p.A803V
DO229346
LAML
ICGC
PDSST
DEG_SPOP_SBC_1
0.1944
p.S811Y
DO229026
LICA
ICGC
PDSST
DEG_SPOP_SBC_1
0.712
p.L819F
ACH-000629
Brain Cancer
CCLE
PDSST
DEG_SPOP_SBC_1
0.1389
p.R806T
ChaGo-K-1
lung
COSMIC
PDSST
DEG_SPOP_SBC_1
0.2778
p.R804Q
NCI-H647
lung
COSMIC
PDSST
DEG_SPOP_SBC_1
0.2222
p.R812K
TASK1
bone
COSMIC
PDSST
DEG_SPOP_SBC_1
0.7237
Drug responses associated with SVIL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14994
Synapsin-3
DEG_SPOP_SBC_1
28:32
PDSST
SPOP
0.9249
More...
O95425
Supervillin
DEG_SPOP_SBC_1
808:812
PDSST
SPOP
0.9671
More...
P35568
Insulin receptor substrate 1
DEG_SPOP_SBC_1
601:605
PDSST
SPOP
0.6597
More...
Q00872
Myosin-binding protein C, slow-type
DEG_SPOP_SBC_1
579:583
PDSST
SPOP
0.7592
More...
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_SPOP_SBC_1
821:825
PDSST
SPOP
0.9316
More...
Q6NSW7
Homeobox protein NANOGP8
DEG_SPOP_SBC_1
66:70
PDSST
SPOP
0.9702
More...
Q8WTP8
Apoptosis-enhancing nuclease
DEG_SPOP_SBC_1
290:294
PDSST
SPOP
0.9842
More...
Q96L73
Histone-lysine N-methyltransferase, H3 lysine-36 specific
DEG_SPOP_SBC_1
282:286
PDSST
SPOP
0.9334
More...
Q9H9S0
Homeobox protein NANOG
DEG_SPOP_SBC_1
66:70
PDSST
SPOP
0.9889
More...
Q9NYZ3
G2 and S phase-expressed protein 1
DEG_SPOP_SBC_1
462:466
PDSST
SPOP
0.9636
More...
Q1X8D7
Leucine-rich repeat-containing protein 36
DEG_SPOP_SBC_1
386:390
PDSST
SPOP
0.5318
More...