DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PDSST
Uniprot ID:
Q00872
Source protein:
Myosin-binding protein C, slow-type
Source gene:
MYBPC1
Class:
DEG_SPOP_SBC_1
Location:
579:583
E3 ligase:
SPOP
DEGRON score:
0.7592
ASA_SCORE:
56.92
COIL:
0.4314
CONS_SCORE:
0.4369
DSS_SCORE:
0.4087
HELIX:
0.0082
FCONS_SCORE:
0.8165
RIG_SCORE:
0.7335
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R572Q
TCGA-A5-A0G2
UCEC
TCGA
PDSST
DEG_SPOP_SBC_1
0.1389
p.R572Q
TCGA-BA-A6D8
HNSC
TCGA
PDSST
DEG_SPOP_SBC_1
0.1389
p.R572Q
DO44426
HNSC
ICGC
PDSST
DEG_SPOP_SBC_1
0.1389
p.R572Q
DO229123
NKTL
ICGC
PDSST
DEG_SPOP_SBC_1
0.1389
p.R572Q
DO41235
UCEC
ICGC
PDSST
DEG_SPOP_SBC_1
0.1389
p.G569D
TCGA-AA-3977
COAD
TCGA
PDSST
DEG_SPOP_SBC_1
0.0556
p.G569D
DO8730
COAD
ICGC
PDSST
DEG_SPOP_SBC_1
0.0556
p.P579S
TCGA-BP-4167
KIRC
TCGA
PDSST
DEG_SPOP_SBC_1
0.6752
p.P579S
DO18799
KIRC
ICGC
PDSST
DEG_SPOP_SBC_1
0.6752
p.D587Y
TCGA-NK-A5D1
LUSC
TCGA
PDSST
DEG_SPOP_SBC_1
0.2222
p.D587Y
DO219213
LUSC
ICGC
PDSST
DEG_SPOP_SBC_1
0.2222
p.T575A
TCGA-V1-A9Z9
PRAD
TCGA
PDSST
DEG_SPOP_SBC_1
0.2222
p.T575A
DO219395
PRAD
ICGC
PDSST
DEG_SPOP_SBC_1
0.2222
p.R591S
TCGA-W3-AA1V
SKCM
TCGA
PDSST
DEG_SPOP_SBC_1
0.1111
p.R591S
DO51276
SKCM
ICGC
PDSST
DEG_SPOP_SBC_1
0.1111
p.R572W
DO46333
OV
ICGC
PDSST
DEG_SPOP_SBC_1
0.1389
p.P579A
SIDM00591
Oral Cavity Carcinoma
GDSC
PDSST
DEG_SPOP_SBC_1
0.6392
p.P579A
ACH-002045
Head and Neck Cancer
CCLE
PDSST
DEG_SPOP_SBC_1
0.6392
p.P579A
HO-1-u-1
upper_aerodigestive_tract
COSMIC
PDSST
DEG_SPOP_SBC_1
0.6392
p.P592A
HO-1-u-1
upper_aerodigestive_tract
COSMIC
PDSST
DEG_SPOP_SBC_1
0.0833
p.K587N
DOK
upper_aerodigestive_tract
COSMIC
PDSST
DEG_SPOP_SBC_1
0.2222
p.T579N
H-EMC-SS
bone
COSMIC
PDSST
DEG_SPOP_SBC_1
0.7055
p.M592I
MCC26
skin
COSMIC
PDSST
DEG_SPOP_SBC_1
0.0833
p.M580I
MCC26
skin
COSMIC
PDSST
DEG_SPOP_SBC_1
0.7618
Drug responses associated with MYBPC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14994
Synapsin-3
DEG_SPOP_SBC_1
28:32
PDSST
SPOP
0.9249
More...
O95425
Supervillin
DEG_SPOP_SBC_1
808:812
PDSST
SPOP
0.9671
More...
P35568
Insulin receptor substrate 1
DEG_SPOP_SBC_1
601:605
PDSST
SPOP
0.6597
More...
Q00872
Myosin-binding protein C, slow-type
DEG_SPOP_SBC_1
579:583
PDSST
SPOP
0.7592
More...
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_SPOP_SBC_1
821:825
PDSST
SPOP
0.9316
More...
Q6NSW7
Homeobox protein NANOGP8
DEG_SPOP_SBC_1
66:70
PDSST
SPOP
0.9702
More...
Q8WTP8
Apoptosis-enhancing nuclease
DEG_SPOP_SBC_1
290:294
PDSST
SPOP
0.9842
More...
Q96L73
Histone-lysine N-methyltransferase, H3 lysine-36 specific
DEG_SPOP_SBC_1
282:286
PDSST
SPOP
0.9334
More...
Q9H9S0
Homeobox protein NANOG
DEG_SPOP_SBC_1
66:70
PDSST
SPOP
0.9889
More...
Q9NYZ3
G2 and S phase-expressed protein 1
DEG_SPOP_SBC_1
462:466
PDSST
SPOP
0.9636
More...
Q1X8D7
Leucine-rich repeat-containing protein 36
DEG_SPOP_SBC_1
386:390
PDSST
SPOP
0.5318
More...