DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PISSS
Uniprot ID:
Q8N983
Source protein:
39S ribosomal protein L43, mitochondrial
Source gene:
MRPL43
Class:
DEG_SPOP_SBC_1
Location:
184:188
E3 ligase:
SPOP
DEGRON score:
0.8798
ASA_SCORE:
63.42
COIL:
0.7862
CONS_SCORE:
0.1976
DSS_SCORE:
0.4619
HELIX:
0.1264
FCONS_SCORE:
-0.0004
RIG_SCORE:
0.698
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S178L
DO737
BLCA
ICGC
PISSS
DEG_SPOP_SBC_1
0.1667
p.S178L
DO51248
SKCM
ICGC
PISSS
DEG_SPOP_SBC_1
0.1667
p.S198P
DO223732
CESC
ICGC
PISSS
DEG_SPOP_SBC_1
0.0556
p.D183N
DO233254
GACA
ICGC
PISSS
DEG_SPOP_SBC_1
0.3056
p.M196V
DO48713
LGG
ICGC
PISSS
DEG_SPOP_SBC_1
0.1111
p.P185H
DO229015
LICA
ICGC
PISSS
DEG_SPOP_SBC_1
0.7694
p.P185S
DO48550
SKCM
ICGC
PISSS
DEG_SPOP_SBC_1
0.6752
p.Q192R
DO229248
THCA
ICGC
PISSS
DEG_SPOP_SBC_1
0.2222
p.T189I
DO41999
UCEC
ICGC
PISSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with MRPL43 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PISSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15444
C-C motif chemokine 25
DEG_SPOP_SBC_1
132:136
PISSS
SPOP
0.8813
More...
O75030
Microphthalmia-associated transcription factor
DEG_SPOP_SBC_1
47:51
PISSS
SPOP
0.9949
More...
O94864
STAGA complex 65 subunit gamma
DEG_SPOP_SBC_1
11:15
PISSS
SPOP
0.9981
More...
O95628
CCR4-NOT transcription complex subunit 4
DEG_SPOP_SBC_1
314:318
PISSS
SPOP
0.9982
More...
P26367
Paired box protein Pax-6
DEG_SPOP_SBC_1
286:290
PISSS
SPOP
0.8502
More...
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
586:590
PISSS
SPOP
0.963
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
931:935
PISSS
SPOP
0.9118
More...
Q8IZH2
5'-3' exoribonuclease 1
DEG_SPOP_SBC_1
1684:1688
PISSS
SPOP
0.9961
More...
Q8N983
39S ribosomal protein L43, mitochondrial
DEG_SPOP_SBC_1
184:188
PISSS
SPOP
0.8798
More...
Q92908
Transcription factor GATA-6
DEG_SPOP_SBC_1
38:42
PISSS
SPOP
0.7589
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SPOP_SBC_1
532:536
PISSS
SPOP
0.9978
More...
Q7M4L6
SH2 domain-containing adapter protein F
DEG_SPOP_SBC_1
62:66
PISSS
SPOP
0.9333
More...
A6NIR3
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 5
DEG_SPOP_SBC_1
354:358
PISSS
SPOP
0.9883
More...
Q5VTM2
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9
DEG_SPOP_SBC_1
399:403
PISSS
SPOP
0.9606
More...
Q5VUJ5
Putative Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7
DEG_SPOP_SBC_1
331:335
PISSS
SPOP
0.9817
More...
Q5VW22
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 6
DEG_SPOP_SBC_1
331:335
PISSS
SPOP
0.9118
More...
Q8TF27
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11
DEG_SPOP_SBC_1
193:197
PISSS
SPOP
0.9254
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
1507:1511
PISSS
SPOP
0.9387
More...