DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPSTT
Uniprot ID:
Q9UBS0
Source protein:
Ribosomal protein S6 kinase beta-2
Source gene:
RPS6KB2
Class:
DEG_SPOP_SBC_1
Location:
455:459
E3 ligase:
SPOP
DEGRON score:
0.8411
ASA_SCORE:
89.1
COIL:
0.9262
CONS_SCORE:
0.4239
DSS_SCORE:
0.7577
HELIX:
0.0378
FCONS_SCORE:
1.0614
RIG_SCORE:
0.5341
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L447V
TCGA-A8-A06Q
BRCA
TCGA
PPSTT
DEG_SPOP_SBC_1
0.1111
p.L447V
DO1263
BRCA
ICGC
PPSTT
DEG_SPOP_SBC_1
0.1111
p.A460T
TCGA-BH-A202
BRCA
TCGA
PPSTT
DEG_SPOP_SBC_1
0.3056
p.A460T
DO4665
BRCA
ICGC
PPSTT
DEG_SPOP_SBC_1
0.3056
p.A460T
SIDM00333
Endometrial Carcinoma
GDSC
PPSTT
DEG_SPOP_SBC_1
0.3056
p.A460T
ACH-000988
Endometrial/Uterine Cancer
CCLE
PPSTT
DEG_SPOP_SBC_1
0.3056
p.P449A
DO222579
ESCA
ICGC
PPSTT
DEG_SPOP_SBC_1
0.1667
p.P454L
DO231942
LICA
ICGC
PPSTT
DEG_SPOP_SBC_1
0.3056
p.P454L
SIDM01622
Breast Carcinoma
GDSC
PPSTT
DEG_SPOP_SBC_1
0.3056
p.G469W
SIDM02021
Esophageal Carcinoma
GDSC
PPSTT
DEG_SPOP_SBC_1
0.0556
p.R465C
SIDM00561
Other Blood Cancers
GDSC
PPSTT
DEG_SPOP_SBC_1
0.1667
p.R465C
ACH-001568
Skin Cancer
CCLE
PPSTT
DEG_SPOP_SBC_1
0.1667
p.R465C
ACH-002274
Leukemia
CCLE
PPSTT
DEG_SPOP_SBC_1
0.1667
p.R465C
MLMA
haematopoietic_and_lymphoid_tissue
COSMIC
PPSTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with RPS6KB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40855
Peroxisomal biogenesis factor 19
DEG_SPOP_SBC_1
38:42
PPSTT
SPOP
0.9672
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
586:590
PPSTT
SPOP
0.827
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1338:1342
PPSTT
SPOP
0.6546
More...
Q12906
Interleukin enhancer-binding factor 3
DEG_SPOP_SBC_1
360:364
PPSTT
SPOP
0.9995
More...
Q68DE3
Basic helix-loop-helix domain-containing protein USF3
DEG_SPOP_SBC_1
557:561
PPSTT
SPOP
0.9894
More...
Q71RC2
La-related protein 4
DEG_SPOP_SBC_1
584:588
PPSTT
SPOP
0.9845
More...
Q7Z410
Transmembrane protease serine 9
DEG_SPOP_SBC_1
744:748
PPSTT
SPOP
0.9917
More...
Q99583
Max-binding protein MNT
DEG_SPOP_SBC_1
370:374
PPSTT
SPOP
0.9764
More...
Q99941
Cyclic AMP-dependent transcription factor ATF-6 beta
DEG_SPOP_SBC_1
262:266
PPSTT
SPOP
0.9683
More...
Q9BQD3
KxDL motif-containing protein 1
DEG_SPOP_SBC_1
117:121
PPSTT
SPOP
0.9044
More...
Q9UBS0
Ribosomal protein S6 kinase beta-2
DEG_SPOP_SBC_1
455:459
PPSTT
SPOP
0.8411
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
4236:4240
PPSTT
SPOP
0.7626
More...
Q9ULU4
Protein kinase C-binding protein 1
DEG_SPOP_SBC_1
747:751
PPSTT
SPOP
0.7904
More...
A3KN83
Protein strawberry notch homolog 1
DEG_SPOP_SBC_1
82:86
PPSTT
SPOP
0.9886
More...
Q9ULI4
Kinesin-like protein KIF26A
DEG_SPOP_SBC_1
163:167
PPSTT
SPOP
0.9599
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
274:278
PPSTT
SPOP
0.994
More...
Q5EBL2
Zinc finger protein 628
DEG_SPOP_SBC_1
650:654
PPSTT
SPOP
0.7452
More...
Q96KJ4
Mesothelin-like protein
DEG_SPOP_SBC_1
608:612
PPSTT
SPOP
0.9833
More...