DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTSTT
Uniprot ID:
Q8NFY4
Source protein:
Semaphorin-6D
Source gene:
SEMA6D
Class:
DEG_SPOP_SBC_1
Location:
573:577
E3 ligase:
SPOP
DEGRON score:
0.9915
ASA_SCORE:
81.96
COIL:
0.9196
CONS_SCORE:
0.365
DSS_SCORE:
0.4183
HELIX:
0.0244
FCONS_SCORE:
0.8351
RIG_SCORE:
0.7453
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T574A
TCGA-BG-A222
UCEC
TCGA
PTSTT
DEG_SPOP_SBC_1
0.6028
p.T574A
DO42977
UCEC
ICGC
PTSTT
DEG_SPOP_SBC_1
0.6028
p.A563V
TCGA-DF-A2KU
UCEC
TCGA
PTSTT
DEG_SPOP_SBC_1
0.0556
p.A563V
DO223286
UCEC
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0556
p.G585V
DO224693
BRCA
ICGC
PTSTT
DEG_SPOP_SBC_1
0.1111
p.K586T
DO233193
GACA
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0833
p.K586T
DO233694
GACA
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0833
p.K586T
DO233874
GACA
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0833
p.K586T
DO38296
STAD
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0833
p.D584N
DO52073
HNSC
ICGC
PTSTT
DEG_SPOP_SBC_1
0.1389
p.K586M
DO26092
LUAD
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0833
p.M581I
DO51291
SKCM
ICGC
PTSTT
DEG_SPOP_SBC_1
0.3333
p.S587F
DO51783
STAD
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0556
p.K586R
DO38241
STAD
ICGC
PTSTT
DEG_SPOP_SBC_1
0.0833
p.S574Y
DO41542
UCEC
ICGC
PTSTT
DEG_SPOP_SBC_1
0.712
p.T580I
DO42665
UCEC
ICGC
PTSTT
DEG_SPOP_SBC_1
0.25
p.I571S
SIDM00845
Burkitt's Lymphoma
GDSC
PTSTT
DEG_SPOP_SBC_1
0.2778
p.T574P
SIDM00845
Burkitt's Lymphoma
GDSC
PTSTT
DEG_SPOP_SBC_1
0.5919
p.T574P
SIDM00035
Thyroid Gland Carcinoma
GDSC
PTSTT
DEG_SPOP_SBC_1
0.5919
p.T574P
ACH-000786
Lymphoma
CCLE
PTSTT
DEG_SPOP_SBC_1
0.5919
p.G584D
SIDM00217
Colorectal Carcinoma
GDSC
PTSTT
DEG_SPOP_SBC_1
0.1389
p.G584D
ACH-000999
Colon/Colorectal Cancer
CCLE
PTSTT
DEG_SPOP_SBC_1
0.1389
p.G584D
SNU-1040
large_intestine
COSMIC
PTSTT
DEG_SPOP_SBC_1
0.1389
p.Q576K
KS-1
central_nervous_system
COSMIC
PTSTT
DEG_SPOP_SBC_1
0.6944
Drug responses associated with SEMA6D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75175
CCR4-NOT transcription complex subunit 3
DEG_SPOP_SBC_1
261:265
PTSTT
SPOP
0.9957
More...
O95274
Ly6/PLAUR domain-containing protein 3
DEG_SPOP_SBC_1
265:269
PTSTT
SPOP
0.6057
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1269:1273
PTSTT
SPOP
0.8061
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3449:3453
PTSTT
SPOP
0.9952
More...
Q6W4X9
Mucin-6
DEG_SPOP_SBC_1
1539:1543
PTSTT
SPOP
0.9933
More...
Q6W4X9
Mucin-6
DEG_SPOP_SBC_1
1932:1936
PTSTT
SPOP
0.7189
More...
Q8IZF6
Adhesion G-protein coupled receptor G4
DEG_SPOP_SBC_1
638:642
PTSTT
SPOP
0.5747
More...
Q8NFY4
Semaphorin-6D
DEG_SPOP_SBC_1
573:577
PTSTT
SPOP
0.9915
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
741:745
PTSTT
SPOP
0.9471
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
810:814
PTSTT
SPOP
0.9461
More...
Q96LM5
Uncharacterized protein C4orf45
DEG_SPOP_SBC_1
9:13
PTSTT
SPOP
0.8223
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
795:799
PTSTT
SPOP
0.9575
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
1885:1889
PTSTT
SPOP
0.9877
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2005:2009
PTSTT
SPOP
0.9831
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2046:2050
PTSTT
SPOP
0.9546
More...
Q9UBL0
cAMP-regulated phosphoprotein 21
DEG_SPOP_SBC_1
647:651
PTSTT
SPOP
0.7583
More...