DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VNSSS
Uniprot ID:
P51522
Source protein:
Zinc finger protein 83
Source gene:
ZNF83
Class:
DEG_SPOP_SBC_1
Location:
47:51
E3 ligase:
SPOP
DEGRON score:
0.6424
ASA_SCORE:
63.02
COIL:
0.6698
CONS_SCORE:
0.3949
DSS_SCORE:
0.4837
HELIX:
0.0924
FCONS_SCORE:
0.7625
RIG_SCORE:
0.6806
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R58H
TCGA-AA-3492
COAD
TCGA
VNSSS
DEG_SPOP_SBC_1
0.1389
p.R58H
DO8224
COAD
ICGC
VNSSS
DEG_SPOP_SBC_1
0.1389
p.R58H
SIDM00447
B-Lymphoblastic Leukemia
GDSC
VNSSS
DEG_SPOP_SBC_1
0.1389
p.R58H
ACH-000960
Leukemia
CCLE
VNSSS
DEG_SPOP_SBC_1
0.1389
p.R58H
ACH-001959
Bile Duct Cancer
CCLE
VNSSS
DEG_SPOP_SBC_1
0.1389
p.R58H
REH
haematopoietic_and_lymphoid_tissue
COSMIC
VNSSS
DEG_SPOP_SBC_1
0.1389
p.H42R
TCGA-AP-A051
UCEC
TCGA
VNSSS
DEG_SPOP_SBC_1
0.1944
p.H42R
DO42673
UCEC
ICGC
VNSSS
DEG_SPOP_SBC_1
0.1944
p.S50C
TCGA-ER-A19F
SKCM
TCGA
VNSSS
DEG_SPOP_SBC_1
0.7541
p.S50C
DO37679
SKCM
ICGC
VNSSS
DEG_SPOP_SBC_1
0.7541
p.E54K
DO228627
GACA
ICGC
VNSSS
DEG_SPOP_SBC_1
0.25
p.E39K
DO222595
MELA
ICGC
VNSSS
DEG_SPOP_SBC_1
0.2222
p.D50A
DO232224
PBCA
ICGC
VNSSS
DEG_SPOP_SBC_1
0.7793
p.R58S
SIDM01103
Squamous Cell Lung Carcinoma
GDSC
VNSSS
DEG_SPOP_SBC_1
0.1389
p.R58S
ACH-000665
Lung Cancer
CCLE
VNSSS
DEG_SPOP_SBC_1
0.1389
p.R58S
SK-MES-1
lung
COSMIC
VNSSS
DEG_SPOP_SBC_1
0.1389
p.V47L
SIDM01199
Hepatocellular Carcinoma
GDSC
VNSSS
DEG_SPOP_SBC_1
0.6765
p.V47L
ACH-000493
Liver Cancer
CCLE
VNSSS
DEG_SPOP_SBC_1
0.6765
p.V47L
SNU-423
liver
COSMIC
VNSSS
DEG_SPOP_SBC_1
0.6765
p.S46A
SIDM00778
Colorectal Carcinoma
GDSC
VNSSS
DEG_SPOP_SBC_1
0.3056
p.S46A
ACH-000403
Colon/Colorectal Cancer
CCLE
VNSSS
DEG_SPOP_SBC_1
0.3056
p.S46A
NCI-H747
large_intestine
COSMIC
VNSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with ZNF83 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14924
Regulator of G-protein signaling 12
DEG_SPOP_SBC_1
1127:1131
VNSSS
SPOP
0.8442
More...
P06241
Tyrosine-protein kinase Fyn
DEG_SPOP_SBC_1
67:71
VNSSS
SPOP
0.9672
More...
P21453
Sphingosine 1-phosphate receptor 1
DEG_SPOP_SBC_1
378:382
VNSSS
SPOP
0.977
More...
Q12889
Oviduct-specific glycoprotein
DEG_SPOP_SBC_1
401:405
VNSSS
SPOP
0.965
More...
Q58F21
Bromodomain testis-specific protein
DEG_SPOP_SBC_1
197:201
VNSSS
SPOP
0.9915
More...
Q5SQI0
Alpha-tubulin N-acetyltransferase 1
DEG_SPOP_SBC_1
342:346
VNSSS
SPOP
0.968
More...
Q5TB80
Centrosomal protein of 162 kDa
DEG_SPOP_SBC_1
454:458
VNSSS
SPOP
0.8991
More...
Q7L4E1
Mitoguardin 2
DEG_SPOP_SBC_1
144:148
VNSSS
SPOP
0.9606
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5227:5231
VNSSS
SPOP
0.8577
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
574:578
VNSSS
SPOP
0.9912
More...
Q99598
Translin-associated protein X
DEG_SPOP_SBC_1
29:33
VNSSS
SPOP
0.9939
More...
A6NGB9
WAS/WASL-interacting protein family member 3
DEG_SPOP_SBC_1
316:320
VNSSS
SPOP
0.946
More...
P51522
Zinc finger protein 83
DEG_SPOP_SBC_1
47:51
VNSSS
SPOP
0.6424
More...
Q92545
Transmembrane protein 131
DEG_SPOP_SBC_1
1624:1628
VNSSS
SPOP
0.9986
More...
A6NKL6
Transmembrane protein 200C
DEG_SPOP_SBC_1
123:127
VNSSS
SPOP
0.7274
More...