DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSTTS
Uniprot ID:
O75157
Source protein:
TSC22 domain family protein 2
Source gene:
TSC22D2
Class:
DEG_SPOP_SBC_1
Location:
521:525
E3 ligase:
SPOP
DEGRON score:
0.9064
ASA_SCORE:
83.66
COIL:
0.922
CONS_SCORE:
0.3352
DSS_SCORE:
0.4567
HELIX:
0.0182
FCONS_SCORE:
0.8772
RIG_SCORE:
0.6774
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V513L
TCGA-CN-5360
HNSC
TCGA
VSTTS
DEG_SPOP_SBC_1
0.1111
p.V513L
DO14662
HNSC
ICGC
VSTTS
DEG_SPOP_SBC_1
0.1111
p.S525F
TCGA-L5-A8NS
ESCA
TCGA
VSTTS
DEG_SPOP_SBC_1
0.7982
p.P529S
TCGA-X2-A95T
SARC
TCGA
VSTTS
DEG_SPOP_SBC_1
0.2222
p.P529S
DO220309
SARC
ICGC
VSTTS
DEG_SPOP_SBC_1
0.2222
p.S525C
DO222937
BTCA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.7541
p.V518M
DO230309
COCA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.25
p.A512S
DO229025
LICA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.0833
p.T527I
SIDM00551
Esophageal Squamous Cell Carcinoma
GDSC
VSTTS
DEG_SPOP_SBC_1
0.2778
p.P529A
SIDM01176
B-Lymphoblastic Leukemia
GDSC
VSTTS
DEG_SPOP_SBC_1
0.2222
p.P529A
ACH-000059
Leukemia
CCLE
VSTTS
DEG_SPOP_SBC_1
0.2222
p.P529A
SUP-B15
haematopoietic_and_lymphoid_tissue
COSMIC
VSTTS
DEG_SPOP_SBC_1
0.2222
p.N530D
ACH-001300
Neuroblastoma
CCLE
VSTTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with TSC22D2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95644
Nuclear factor of activated T-cells, cytoplasmic 1
DEG_SPOP_SBC_1
502:506
VSTTS
SPOP
0.7497
More...
O95678
Keratin, type II cytoskeletal 75
DEG_SPOP_SBC_1
539:543
VSTTS
SPOP
0.9912
More...
P13647
Keratin, type II cytoskeletal 5
DEG_SPOP_SBC_1
578:582
VSTTS
SPOP
0.9568
More...
P47736
Rap1 GTPase-activating protein 1
DEG_SPOP_SBC_1
617:621
VSTTS
SPOP
0.9852
More...
Q5SW79
Centrosomal protein of 170 kDa
DEG_SPOP_SBC_1
1128:1132
VSTTS
SPOP
0.9947
More...
Q8WWK9
Cytoskeleton-associated protein 2
DEG_SPOP_SBC_1
243:247
VSTTS
SPOP
0.9283
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12353:12357
VSTTS
SPOP
0.6523
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
13758:13762
VSTTS
SPOP
0.7914
More...
Q99963
Endophilin-A3
DEG_SPOP_SBC_1
270:274
VSTTS
SPOP
0.9977
More...
Q9HCM3
UPF0606 protein KIAA1549
DEG_SPOP_SBC_1
883:887
VSTTS
SPOP
0.9959
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
1378:1382
VSTTS
SPOP
0.9643
More...
O75157
TSC22 domain family protein 2
DEG_SPOP_SBC_1
521:525
VSTTS
SPOP
0.9064
More...