DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSTTS
Uniprot ID:
Q99963
Source protein:
Endophilin-A3
Source gene:
SH3GL3
Class:
DEG_SPOP_SBC_1
Location:
270:274
E3 ligase:
SPOP
DEGRON score:
0.9977
ASA_SCORE:
71.92
COIL:
0.8354
CONS_SCORE:
0.3651
DSS_SCORE:
0.5299
HELIX:
0.0544
FCONS_SCORE:
1.0545
RIG_SCORE:
0.6899
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G280C
TCGA-AX-A06F
UCEC
TCGA
VSTTS
DEG_SPOP_SBC_1
0.1667
p.P284L
TCGA-EE-A181
SKCM
TCGA
VSTTS
DEG_SPOP_SBC_1
0.0556
p.L267F
TCGA-EM-A1YB
THCA
TCGA
VSTTS
DEG_SPOP_SBC_1
0.25
p.T278K
TCGA-N8-A4PM
UCS
TCGA
VSTTS
DEG_SPOP_SBC_1
0.2222
p.G280D
TCGA-S5-A6DX
BLCA
TCGA
VSTTS
DEG_SPOP_SBC_1
0.1667
p.T281S
DO50388
ESAD
ICGC
VSTTS
DEG_SPOP_SBC_1
0.1389
p.R261L
DO228974
LICA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.1944
p.R266M
DO229026
LICA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.2222
p.K264N
DO49875
LUAD
ICGC
VSTTS
DEG_SPOP_SBC_1
0.6111
p.R261Q
DO220877
MELA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.1944
p.R261Q
DO37406
SKCM
ICGC
VSTTS
DEG_SPOP_SBC_1
0.1944
p.R261Q
DO47631
SKCM
ICGC
VSTTS
DEG_SPOP_SBC_1
0.1944
p.R261Q
DO219482
SKCM
ICGC
VSTTS
DEG_SPOP_SBC_1
0.1944
p.E274K
DO222875
MELA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.7022
p.L275F
DO39143
THCA
ICGC
VSTTS
DEG_SPOP_SBC_1
0.3056
p.P267H
DO41542
UCEC
ICGC
VSTTS
DEG_SPOP_SBC_1
0.25
p.E262D
SIDM00656
Burkitt's Lymphoma
GDSC
VSTTS
DEG_SPOP_SBC_1
0.1111
p.E262D
SIDM00844
Burkitt's Lymphoma
GDSC
VSTTS
DEG_SPOP_SBC_1
0.1111
p.E262D
SIDM00785
Acute Myeloid Leukemia
GDSC
VSTTS
DEG_SPOP_SBC_1
0.1111
p.E262D
SIDM00641
Burkitt's Lymphoma
GDSC
VSTTS
DEG_SPOP_SBC_1
0.1111
p.E262D
SIDM01749
Osteosarcoma
GDSC
VSTTS
DEG_SPOP_SBC_1
0.1111
p.S273R
SIDM00660
Colorectal Carcinoma
GDSC
VSTTS
DEG_SPOP_SBC_1
0.7427
p.S273R
LS-411N
large_intestine
COSMIC
VSTTS
DEG_SPOP_SBC_1
0.7427
p.S265R
ACH-000985
Colon/Colorectal Cancer
CCLE
VSTTS
DEG_SPOP_SBC_1
0.6389
p.S265R
LS-411N
large_intestine
COSMIC
VSTTS
DEG_SPOP_SBC_1
0.6389
p.P284S
ACH-002309
Sarcoma
CCLE
VSTTS
DEG_SPOP_SBC_1
0.0556
p.P284S
SW684
soft_tissue
COSMIC
VSTTS
DEG_SPOP_SBC_1
0.0556
p.G280S
NCI-H322M
lung
COSMIC
VSTTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with SH3GL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95644
Nuclear factor of activated T-cells, cytoplasmic 1
DEG_SPOP_SBC_1
502:506
VSTTS
SPOP
0.7497
More...
O95678
Keratin, type II cytoskeletal 75
DEG_SPOP_SBC_1
539:543
VSTTS
SPOP
0.9912
More...
P13647
Keratin, type II cytoskeletal 5
DEG_SPOP_SBC_1
578:582
VSTTS
SPOP
0.9568
More...
P47736
Rap1 GTPase-activating protein 1
DEG_SPOP_SBC_1
617:621
VSTTS
SPOP
0.9852
More...
Q5SW79
Centrosomal protein of 170 kDa
DEG_SPOP_SBC_1
1128:1132
VSTTS
SPOP
0.9947
More...
Q8WWK9
Cytoskeleton-associated protein 2
DEG_SPOP_SBC_1
243:247
VSTTS
SPOP
0.9283
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12353:12357
VSTTS
SPOP
0.6523
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
13758:13762
VSTTS
SPOP
0.7914
More...
Q99963
Endophilin-A3
DEG_SPOP_SBC_1
270:274
VSTTS
SPOP
0.9977
More...
Q9HCM3
UPF0606 protein KIAA1549
DEG_SPOP_SBC_1
883:887
VSTTS
SPOP
0.9959
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
1378:1382
VSTTS
SPOP
0.9643
More...
O75157
TSC22 domain family protein 2
DEG_SPOP_SBC_1
521:525
VSTTS
SPOP
0.9064
More...