DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTSTS
Uniprot ID:
A1A519
Source protein:
Protein FAM170A
Source gene:
FAM170A
Class:
DEG_SPOP_SBC_1
Location:
51:55
E3 ligase:
SPOP
DEGRON score:
0.8827
ASA_SCORE:
62.14
COIL:
0.7024
CONS_SCORE:
0.44
DSS_SCORE:
0.3022
HELIX:
0.165
FCONS_SCORE:
1.1149
RIG_SCORE:
0.7514
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R65L
TCGA-44-2659
LUAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.0556
p.R65L
DO23744
LUAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.0556
p.S63Y
TCGA-A5-A2K5
UCEC
TCGA
VTSTS
DEG_SPOP_SBC_1
0.1111
p.S63Y
DO41379
UCEC
ICGC
VTSTS
DEG_SPOP_SBC_1
0.1111
p.V61I
TCGA-A6-2684
COAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.1667
p.V61I
TCGA-AA-3811
COAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.1667
p.V61I
TCGA-FP-A9TM
STAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.1667
p.V61I
DO9074
COAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.1667
p.V61I
DO10236
COAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.1667
p.V61I
DO7962
COAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.1667
p.V61I
DO222332
STAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.1667
p.V61I
SIDM01296
Esophageal Carcinoma
GDSC
VTSTS
DEG_SPOP_SBC_1
0.1667
p.E56K
TCGA-AA-3984
COAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.3056
p.E56K
TCGA-AA-A00N
COAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.3056
p.E56K
DO9002
COAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.3056
p.E56K
DO9876
COAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.3056
p.E56K
SIDM00660
Colorectal Carcinoma
GDSC
VTSTS
DEG_SPOP_SBC_1
0.3056
p.E56K
ACH-000985
Colon/Colorectal Cancer
CCLE
VTSTS
DEG_SPOP_SBC_1
0.3056
p.E56K
LS-411N
large_intestine
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.3056
p.G43D
TCGA-AA-A010
COAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.1111
p.S53F
TCGA-C5-A8XJ
CESC
TCGA
VTSTS
DEG_SPOP_SBC_1
0.7982
p.S53F
DO49902
CESC
ICGC
VTSTS
DEG_SPOP_SBC_1
0.7982
p.C58R
TCGA-CD-A48A
STAD
TCGA
VTSTS
DEG_SPOP_SBC_1
0.25
p.C58R
DO47781
STAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.25
p.S59C
TCGA-CR-6472
HNSC
TCGA
VTSTS
DEG_SPOP_SBC_1
0.2222
p.S59C
DO15870
HNSC
ICGC
VTSTS
DEG_SPOP_SBC_1
0.2222
p.G47E
TCGA-EB-A3Y7
SKCM
TCGA
VTSTS
DEG_SPOP_SBC_1
0.2222
p.G47E
DO37499
SKCM
ICGC
VTSTS
DEG_SPOP_SBC_1
0.2222
p.S55F
TCGA-IH-A3EA
SKCM
TCGA
VTSTS
DEG_SPOP_SBC_1
0.7982
p.S55F
DO222595
MELA
ICGC
VTSTS
DEG_SPOP_SBC_1
0.7982
p.S55F
DO37667
SKCM
ICGC
VTSTS
DEG_SPOP_SBC_1
0.7982
p.A41S
DO228976
LICA
ICGC
VTSTS
DEG_SPOP_SBC_1
0.0556
p.V51I
DO51142
PRAD
ICGC
VTSTS
DEG_SPOP_SBC_1
0.7076
p.S59Y
SIDM00789
Colorectal Carcinoma
GDSC
VTSTS
DEG_SPOP_SBC_1
0.2222
p.S59Y
ACH-000997
Colon/Colorectal Cancer
CCLE
VTSTS
DEG_SPOP_SBC_1
0.2222
p.S59Y
HCT-15
large_intestine
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.2222
p.R65H
SIDM00878
Breast Carcinoma
GDSC
VTSTS
DEG_SPOP_SBC_1
0.0556
p.R65H
SIDM00534
Colorectal Carcinoma
GDSC
VTSTS
DEG_SPOP_SBC_1
0.0556
p.R65H
ACH-000930
Breast Cancer
CCLE
VTSTS
DEG_SPOP_SBC_1
0.0556
p.R65H
ACH-000986
Colon/Colorectal Cancer
CCLE
VTSTS
DEG_SPOP_SBC_1
0.0556
p.R65H
HCC1569
breast
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.0556
p.R65H
HT-115
large_intestine
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.0556
p.G47R
SIDM00349
Esophageal Squamous Cell Carcinoma
GDSC
VTSTS
DEG_SPOP_SBC_1
0.2222
p.G47R
ACH-000318
Esophageal Cancer
CCLE
VTSTS
DEG_SPOP_SBC_1
0.2222
p.G47R
TE-10
oesophagus
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.2222
p.R45Q
CP66-MEL
skin
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.1667
p.S61L
COLO-783
skin
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.1667
p.R51H
NY
bone
COSMIC
VTSTS
DEG_SPOP_SBC_1
0.8244
Drug responses associated with FAM170A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1A519
Protein FAM170A
DEG_SPOP_SBC_1
51:55
VTSTS
SPOP
0.8827
More...
O75475
PC4 and SFRS1-interacting protein
DEG_SPOP_SBC_1
269:273
VTSTS
SPOP
0.9904
More...
P35638
DNA damage-inducible transcript 3 protein
DEG_SPOP_SBC_1
73:77
VTSTS
SPOP
0.8287
More...
Q01546
Keratin, type II cytoskeletal 2 oral
DEG_SPOP_SBC_1
512:516
VTSTS
SPOP
0.6377
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
804:808
VTSTS
SPOP
0.8927
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1557:1561
VTSTS
SPOP
0.8949
More...
Q14966
Zinc finger protein 638
DEG_SPOP_SBC_1
787:791
VTSTS
SPOP
0.9967
More...
Q6W4X9
Mucin-6
DEG_SPOP_SBC_1
1761:1765
VTSTS
SPOP
0.5627
More...
Q7Z7A1
Centriolin
DEG_SPOP_SBC_1
2288:2292
VTSTS
SPOP
0.8742
More...
Q8IZF6
Adhesion G-protein coupled receptor G4
DEG_SPOP_SBC_1
1248:1252
VTSTS
SPOP
0.959
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1139:1143
VTSTS
SPOP
0.9584
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1376:1380
VTSTS
SPOP
0.995
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1801:1805
VTSTS
SPOP
0.9919
More...
Q96T58
Msx2-interacting protein
DEG_SPOP_SBC_1
2549:2553
VTSTS
SPOP
0.9158
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
1006:1010
VTSTS
SPOP
0.8996
More...
Q8NET4
Retrotransposon Gag-like protein 9
DEG_SPOP_SBC_1
870:874
VTSTS
SPOP
0.9347
More...