Search results: The pahtway p3470 has 78 genes in the original annotation. Currently, there are 44 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
80313LRRC27-leucine rich repeat containing 2710q26.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
664BNIP3NIP3BCL2/adenovirus E1B 19kDa interacting protein 310q26.3CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_IIA
22800RRAS2TC21related RAS viral (r-ras) oncogene homolog 211p15.2CV:PGCnp
DMG:Wockner_2014
10068IL18BPIL18BPainterleukin 18 binding protein11q13CV:PGCnp
PMID:cooccur
23504RIMBP2PPP1R133 | RBP2 | RIM-BP2RIMS binding protein 212q24.33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
2155F7SPCAcoagulation factor VII13q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2159F10FX | FXAcoagulation factor X13q34CV:PGCnp
GO_Annotation
Network
PMID:cooccur
112399EGLN3HIFP4H3 | HIFPH3 | PHD3egl-9 family hypoxia-inducible factor 314q13.1CV:GWASdb
CV:PGCnp
GSMA_I
113146AHNAK2C14orf78AHNAK nucleoprotein 214q32.33CV:PGCnp
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
4240MFGE8BA46 | EDIL1 | HMFG | HsT19888 | MFG-E8 | MFGM | OAcGD3S | SED1 | SPAG10 | hP47milk fat globule-EGF factor 8 protein15q25CV:PGCnp
51704GPRC5BRAIG-2 | RAIG2G protein-coupled receptor class C group 5 member B16p12CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_IIE
CompositeSet
23042PDXDC1LP8165pyridoxal-dependent decarboxylase domain containing 116p13.11CV:PGCnp
GSMA_IIE
Ascano FMRP targets
230ALDOCALDCaldolase, fructose-bisphosphate C17cen-q12PMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3927LASP1Lasp-1 | MLN50LIM and SH3 protein 117q11-q21.3CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
3690ITGB3BDPLT16 | BDPLT2 | CD61 | GP3A | GPIIIa | GTintegrin subunit beta 317q21.32CV:PGCnp
Network
PMID:cooccur
7001PRDX2HEL-S-2a | NKEF-B | NKEFB | PRP | PRX2 | PRXII | PTX1 | TDPX1 | TPX1 | TSAperoxiredoxin 219p13.2CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
84971ATG4DAPG4-D | APG4D | AUTL4autophagy related 4D cysteine peptidase19p13.2DMG:Jaffe_2016
55283MCOLN3TRP-ML3 | TRPML3mucolipin 31p22.3CV:PGCnp
6513SLC2A1CSE | DYT17 | DYT18 | DYT9 | EIG12 | GLUT | GLUT-1 | GLUT1 | GLUT1DS | HTLVR | PED | SDCHCNsolute carrier family 2 member 11p34.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
CELL METABOLISM
65018PINK1BRPK | PARK6PTEN induced putative kinase 11p36DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
713C1QB-complement component 1, q subcomponent, B chain1p36.12CV:PGCnp
PMID:cooccur
23569PADI4PAD | PAD4 | PADI5 | PDI4 | PDI5peptidyl arginine deiminase, type IV1p36.13CV:GWASdb
CV:PGCnp
PMID:cooccur
79180EFHD2SWS1EF-hand domain family member D21p36.21CV:PGCnp
PMID:cooccur
CompositeSet
1513CTSKCTS02 | CTSO | CTSO1 | CTSO2 | PKND | PYCDcathepsin K1q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
6646SOAT1ACACT | ACAT | ACAT-1 | ACAT1 | SOAT | STATsterol O-acyltransferase 11q25CV:PGCnp
DNM:Fromer_2014
CompositeSet
10544PROCRCCCA | CCD41 | EPCRprotein C receptor20q11.2CV:PGCnp
3929LBPBPIFD2lipopolysaccharide binding protein20q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
57642COL20A1bA261N11.4collagen type XX alpha 120q13.33CV:PGCnp
9394HS6ST1HH15 | HS6STheparan sulfate 6-O-sulfotransferase 12q21CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Ascano FMRP targets
54870QRICH1-glutamine rich 13p21.31CV:PGCnp
Network
868CBLBCbl-b | Nbla00127 | RNF56Cbl proto-oncogene B, E3 ubiquitin protein ligase3q13.11CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
7345UCHL1HEL-117 | HEL-S-53 | NDGOA | PARK5 | PGP 9.5 | PGP9.5 | PGP95 | Uch-L1ubiquitin C-terminal hydrolase L14p14CV:PGCnp
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7096TLR1CD281 | TIL | TIL. LPRS5 | rsc786toll like receptor 14p14CV:PGCnp
PMID:cooccur
4258MGST2GST2 | MGST-IImicrosomal glutathione S-transferase 24q28.3CV:PGCnp
353322ANKRD37Lrp2bpankyrin repeat domain 374q35.1DMG:Jaffe_2016
64417C5orf28-chromosome 5 open reading frame 285p12CV:GWASdb
CV:PGCnp
7422VEGFAMVCD1 | VEGF | VPFvascular endothelial growth factor A6p12CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3304HSPA1BHSP70-1B | HSP70-2 | HSP70.2heat shock protein family A (Hsp70) member 1B6p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
383ARG1-arginase 16q23CV:PGCnp
DMG:vanEijk_2014
3482IGF2RCD222 | CI-M6PR | CIMPR | M6P-R | M6P/IGF2R | MPR 300 | MPR1 | MPR300 | MPRIinsulin like growth factor 2 receptor6q26CV:PGCnp
DMG:Montano_2016
PMID:cooccur
Ascano FMRP targets
9414TJP2C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2tight junction protein 29q13-q21CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets